Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   FPL20_RS05475 Genome accession   NZ_CP045478
Coordinates   1044806..1045180 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain JD-014     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1039806..1050180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS05455 (FPL20_GE01008) acdA 1040345..1041484 (+) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -
  FPL20_RS05460 (FPL20_GE01009) rpoE 1041667..1042188 (+) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  FPL20_RS05465 (FPL20_GE01010) pyrG 1042430..1044037 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  FPL20_RS05470 (FPL20_GE01011) ywjG 1044119..1044640 (-) 522 WP_003242809.1 DUF2529 domain-containing protein -
  FPL20_RS05475 (FPL20_GE01012) letA 1044806..1045180 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  FPL20_RS05480 (FPL20_GE01013) fbaA 1045361..1046218 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  FPL20_RS05485 (FPL20_GE01014) fsa 1046338..1046976 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  FPL20_RS05490 (FPL20_GE01015) murAB 1047355..1048644 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  FPL20_RS05495 (FPL20_GE01016) glpX 1048675..1049640 (+) 966 WP_003242962.1 class II fructose-bisphosphatase -
  FPL20_RS05500 - 1049855..1050016 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=344667 FPL20_RS05475 WP_003227621.1 1044806..1045180(+) (letA) [Bacillus subtilis strain JD-014]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=344667 FPL20_RS05475 WP_003227621.1 1044806..1045180(+) (letA) [Bacillus subtilis strain JD-014]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363