Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | FPL20_RS03235 | Genome accession | NZ_CP045478 |
| Coordinates | 609686..610282 (-) | Length | 198 a.a. |
| NCBI ID | WP_003225425.1 | Uniprot ID | G4NT17 |
| Organism | Bacillus subtilis strain JD-014 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 604686..615282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPL20_RS03225 (FPL20_GE00588) | bofA | 609114..609377 (-) | 264 | WP_003225421.1 | sigma-K factor-processing regulator BofA | - |
| FPL20_RS03230 (FPL20_GE00589) | yaaL | 609444..609668 (-) | 225 | WP_003242387.1 | YaaL family protein | - |
| FPL20_RS03235 (FPL20_GE00590) | recR | 609686..610282 (-) | 597 | WP_003225425.1 | recombination protein RecR | Machinery gene |
| FPL20_RS03240 (FPL20_GE00591) | ebfC | 610297..610620 (-) | 324 | WP_003225427.1 | YbaB/EbfC family nucleoid-associated protein | - |
| FPL20_RS03245 (FPL20_GE00592) | dnaX | 610644..612335 (-) | 1692 | WP_003247135.1 | DNA polymerase III subunit gamma/tau | - |
| FPL20_RS03255 (FPL20_GE00593) | tadA | 612812..613297 (-) | 486 | WP_003247140.1 | tRNA adenosine(34) deaminase TadA | - |
| FPL20_RS03260 (FPL20_GE00594) | yaaI | 613383..613928 (+) | 546 | WP_003247139.1 | isochorismatase family cysteine hydrolase | - |
| FPL20_RS03265 (FPL20_GE00595) | sleL | 613998..615281 (+) | 1284 | WP_003247133.1 | glycoside hydrolase family 18 protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21974.53 Da Isoelectric Point: 5.3504
>NTDB_id=344656 FPL20_RS03235 WP_003225425.1 609686..610282(-) (recR) [Bacillus subtilis strain JD-014]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=344656 FPL20_RS03235 WP_003225425.1 609686..610282(-) (recR) [Bacillus subtilis strain JD-014]
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAAGACGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAAGACGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATCGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| recR | Streptococcus pneumoniae R6 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.041 |
98.99 |
0.515 |