Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ERW13_RS05480 Genome accession   NZ_CP035791
Coordinates   1054931..1055917 (-) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain 592     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1049931..1060917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ERW13_RS05455 - 1050191..1050538 (-) 348 WP_001242103.1 hypothetical protein -
  ERW13_RS05460 - 1050724..1051317 (+) 594 WP_000224619.1 CYTH domain-containing protein -
  ERW13_RS05465 - 1051421..1051786 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ERW13_RS05470 yjbH 1051809..1052615 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  ERW13_RS05475 pepF 1053075..1054883 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  ERW13_RS05480 coiA 1054931..1055917 (-) 987 WP_000959282.1 competence protein CoiA family protein Machinery gene
  ERW13_RS05485 mecA 1056038..1056757 (-) 720 WP_001217728.1 adaptor protein MecA -
  ERW13_RS05490 spxA 1057128..1057523 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  ERW13_RS05495 trpS 1057817..1058806 (+) 990 WP_130163217.1 tryptophan--tRNA ligase -
  ERW13_RS05500 opp4C 1058848..1059729 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  ERW13_RS05505 opp4B 1059741..1060703 (-) 963 WP_000915997.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=344444 ERW13_RS05480 WP_000959282.1 1054931..1055917(-) (coiA) [Staphylococcus aureus strain 592]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=344444 ERW13_RS05480 WP_000959282.1 1054931..1055917(-) (coiA) [Staphylococcus aureus strain 592]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976

Multiple sequence alignment