Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ERW13_RS05345 Genome accession   NZ_CP035791
Coordinates   1024852..1025421 (+) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain 592     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1019852..1030421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ERW13_RS05310 - 1021066..1021338 (-) 273 WP_001797239.1 lactococcin 972 family bacteriocin -
  ERW13_RS05315 - 1021348..1021449 (-) 102 WP_001792055.1 hypothetical protein -
  ERW13_RS05320 - 1021995..1022114 (-) 120 WP_020978111.1 hypothetical protein -
  ERW13_RS05325 - 1022365..1022967 (-) 603 WP_001033865.1 CPBP family glutamic-type intramembrane protease -
  ERW13_RS05330 - 1022982..1023158 (-) 177 WP_000214898.1 YkvS family protein -
  ERW13_RS05335 - 1023357..1024343 (+) 987 WP_130163216.1 lipoate--protein ligase -
  ERW13_RS05340 - 1024424..1024642 (-) 219 WP_000876826.1 IDEAL domain-containing protein -
  ERW13_RS05345 comK/comK1 1024852..1025421 (+) 570 WP_000287265.1 competence protein ComK Regulator
  ERW13_RS05360 - 1025908..1027419 (-) 1512 WP_000414165.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  ERW13_RS05365 - 1027558..1028916 (-) 1359 WP_000021868.1 TrkH family potassium uptake protein -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=344443 ERW13_RS05345 WP_000287265.1 1024852..1025421(+) (comK/comK1) [Staphylococcus aureus strain 592]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=344443 ERW13_RS05345 WP_000287265.1 1024852..1025421(+) (comK/comK1) [Staphylococcus aureus strain 592]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCTATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment