Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GCU76_RS20645 Genome accession   NZ_CP045425
Coordinates   3808054..3808428 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain JAAA     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3803054..3813428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU76_RS20620 - 3803219..3803380 (-) 162 WP_003227632.1 hypothetical protein -
  GCU76_RS20625 glpX 3803594..3804559 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  GCU76_RS20630 murAB 3804590..3805879 (-) 1290 WP_041337848.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  GCU76_RS20635 fsa 3806258..3806896 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  GCU76_RS20640 fbaA 3807016..3807873 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  GCU76_RS20645 letA 3808054..3808428 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  GCU76_RS20650 ywjG 3808594..3809115 (+) 522 WP_017696003.1 DUF2529 domain-containing protein -
  GCU76_RS22930 - 3809265..3809429 (+) 165 WP_017696002.1 transposase -
  GCU76_RS20655 - 3809824..3810279 (+) 456 WP_080320312.1 IS3 family transposase -
  GCU76_RS20660 pyrG 3810335..3811942 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  GCU76_RS20665 rpoE 3812184..3812690 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=344271 GCU76_RS20645 WP_003227621.1 3808054..3808428(-) (letA) [Bacillus subtilis strain JAAA]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=344271 GCU76_RS20645 WP_003227621.1 3808054..3808428(-) (letA) [Bacillus subtilis strain JAAA]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363