Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   GCU76_RS17695 Genome accession   NZ_CP045425
Coordinates   3236513..3237376 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain JAAA     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3231513..3242376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU76_RS17660 mrpE 3231681..3232157 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  GCU76_RS17665 mrpF 3232157..3232441 (+) 285 WP_041052851.1 Na(+)/H(+) antiporter subunit F1 -
  GCU76_RS17670 mnhG 3232425..3232799 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  GCU76_RS17675 yuxO 3232838..3233218 (-) 381 WP_041052848.1 hotdog fold thioesterase -
  GCU76_RS17680 comA 3233237..3233881 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GCU76_RS17685 comP 3233962..3236274 (-) 2313 WP_103330147.1 sensor histidine kinase Regulator
  GCU76_RS17690 comX 3236290..3236511 (-) 222 WP_014480704.1 competence pheromone ComX -
  GCU76_RS17695 comQ 3236513..3237376 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  GCU76_RS17700 degQ 3237562..3237702 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GCU76_RS17705 - 3237924..3238049 (+) 126 WP_003228793.1 hypothetical protein -
  GCU76_RS17710 - 3238163..3238531 (+) 369 WP_014477834.1 hypothetical protein -
  GCU76_RS17715 pdeH 3238507..3239736 (-) 1230 WP_041339151.1 cyclic di-GMP phosphodiesterase -
  GCU76_RS17720 pncB 3239873..3241345 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  GCU76_RS17725 pncA 3241361..3241912 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=344253 GCU76_RS17695 WP_014480705.1 3236513..3237376(-) (comQ) [Bacillus subtilis strain JAAA]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=344253 GCU76_RS17695 WP_014480705.1 3236513..3237376(-) (comQ) [Bacillus subtilis strain JAAA]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439