Detailed information NTG0034410

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: SDEG_RS09375
• Genome accession: NC_012891
• Coordinates: 1857511..1858563 (-)
• Length: 350 a.a.
• NCBI ID: WP_012767556.1
• Uniprot ID: A0A9X8T4H4
• Organism: Streptococcus dysgalactiae subsp. equisimilis GGS_124
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1852511..1863563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDEG_RS09350 (SDEG_1922)	rimI	1853082..1853507 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
SDEG_RS09355 (SDEG_1923)	tsaB	1853509..1854207 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SDEG_RS09360 (SDEG_1924)	-	1854493..1854723 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
SDEG_RS09365 (SDEG_1925)	rnjA	1854725..1856407 (+)	1683	WP_003056700.1	ribonuclease J1	-
SDEG_RS09370 (SDEG_1926)	amiF	1856586..1857518 (-)	933	WP_003060110.1	ABC transporter ATP-binding protein	Regulator
SDEG_RS09375 (SDEG_1927)	oppD	1857511..1858563 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
SDEG_RS09380 (SDEG_1928)	-	1858575..1859606 (-)	1032	WP_003058013.1	ABC transporter permease	-
SDEG_RS09385 (SDEG_1929)	-	1859616..1860530 (-)	915	WP_003052794.1	ABC transporter permease	-
SDEG_RS09390 (SDEG_1930)	-	1860798..1862453 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38667.36 Da
• Isoelectric Point: 5.8490

>NTDB_id=34410 SDEG_RS09375 WP_012767556.1 1857511..1858563(-) (oppD) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFDLKKGETLAIVGESGSGKSVTTRTLMGLNAKNANLSGEIDFKGKKLNAL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENISKQKALSRALELMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILKLMKEIQQQTESSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTASGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHVEAPPMFKVSDTHYAATWLL
DERAPKVTPPVQIQKRWAKWQKREGGKLNE

Nucleotide

• Length: 1053 bp

>NTDB_id=34410 SDEG_RS09375 WP_012767556.1 1857511..1858563(-) (oppD) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
ATGACAAACGAAACCATTTTAAGTGTTAAAAACCTCCACGTTGATTTCAAAACCTATGCAGGGGATGTGAAAGCTATTCG
CGATATTAGTTTTGACCTCAAAAAAGGAGAAACGCTTGCGATTGTTGGGGAATCTGGATCAGGAAAATCAGTGACCACTA
GGACCTTGATGGGCTTAAATGCTAAAAATGCTAACCTTTCTGGGGAAATTGATTTTAAAGGAAAAAAACTCAATGCCCTT
AAGGAAGAAGAATGGGTTAAGGTACGTGGTAAAGAAATTGCCATGATTTTCCAAGACCCAATGACCAGTCTCGATCCAAC
GATGAAAATCGGAATGCAAATTGCTGAAGCTATTTTGATTCATGAGAATATCAGTAAGCAAAAAGCCTTGAGTCGTGCTC
TTGAATTGATGCATCAAGTAGGTATTCCAAATGCTGAAGAGCATATTAATGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAGCGTGCTGTGATTGCTATCGCTCTCGCAGCTAATCCAGAAATCCTGATTGCTGATGAACCGACCACAGCACTTGA
TGTTACCATTCAGGCACAAATCTTGAAATTAATGAAAGAAATCCAACAACAGACGGAATCATCTATTATTTTCATTACCC
ATGACCTTGGAGTTGTGGCTGGTATGGCTGACCGTGTCGCGGTAATGTATGCTGGAAAAATTGTTGAGTATGGAACGGTG
GATGAAGTCTTTTATAACCCGCAACACCCTTATACATGGGGCTTGCTTAATTCTATGCCAACCACAGATACCGCCTCAGG
GAGTTTAGAATCTATTCCAGGAACGCCGCCTGACTTGCTTAATCCTCCTAAGGGAGATGCTTTTGCAGCCCGCAATGAAT
TTGCCTTGGATATTGATCATGTGGAGGCTCCGCCGATGTTTAAGGTCAGCGACACCCATTATGCGGCAACTTGGTTATTA
GATGAGCGAGCGCCCAAAGTCACTCCGCCAGTTCAAATTCAAAAACGATGGGCAAAATGGCAAAAACGAGAAGGAGGCAA
GCTAAATGAATGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.429	100	0.794
amiE	Streptococcus salivarius strain HSISS4	55.394	98	0.543
amiE	Streptococcus thermophilus LMG 18311	56.325	94.857	0.534
amiE	Streptococcus thermophilus LMD-9	56.325	94.857	0.534