Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | EPB58_RS19050 | Genome accession | NZ_CP035693 |
| Coordinates | 1898311..1898925 (-) | Length | 204 a.a. |
| NCBI ID | WP_005446268.1 | Uniprot ID | A0A9X3MGU4 |
| Organism | Vibrio harveyi strain 2011V-1164 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1893311..1903925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPB58_RS19040 | aceF | 1894408..1896315 (+) | 1908 | WP_154203417.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| EPB58_RS19045 | lpdA | 1896559..1897989 (+) | 1431 | WP_005446266.1 | dihydrolipoyl dehydrogenase | - |
| EPB58_RS19050 | opaR | 1898311..1898925 (-) | 615 | WP_005446268.1 | transcriptional regulator OpaR | Regulator |
| EPB58_RS19055 | hpt | 1899247..1899777 (+) | 531 | WP_005446271.1 | hypoxanthine phosphoribosyltransferase | - |
| EPB58_RS19060 | can | 1899866..1900534 (-) | 669 | WP_005446273.1 | carbonate dehydratase | - |
| EPB58_RS19065 | - | 1900818..1902488 (+) | 1671 | WP_009698752.1 | SulP family inorganic anion transporter | - |
| EPB58_RS19070 | - | 1902722..1903639 (+) | 918 | WP_005446278.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23559.82 Da Isoelectric Point: 6.0756
>NTDB_id=343799 EPB58_RS19050 WP_005446268.1 1898311..1898925(-) (opaR) [Vibrio harveyi strain 2011V-1164]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPE
HLANLFHGICYSIFVQANRSKSEAELSTLVSAYLDMLCIYNRDH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHEPE
HLANLFHGICYSIFVQANRSKSEAELSTLVSAYLDMLCIYNRDH
Nucleotide
Download Length: 615 bp
>NTDB_id=343799 EPB58_RS19050 WP_005446268.1 1898311..1898925(-) (opaR) [Vibrio harveyi strain 2011V-1164]
ATGGACTCAATTGCAAAGAGACCTCGTACTAGGCTTTCCCCTCTAAAACGTAAACAGCAACTAATGGAAATCGCTCTTGA
AGTGTTTGCTCGTCGCGGCATTGGTCGTGGTGGTCACGCTGATATTGCAGAGATTGCTCAAGTTTCTGTTGCGACAGTAT
TTAACTACTTCCCAACTCGCGAAGACTTGGTGGATGAAGTTCTGAATCACGTGGTTCGTCAATTCTCGAACTTCTTATCA
GATAACATCGACTTAGACATTCATGCACGCGAGAACATCGCTAACATCACTAACGCAATGATTGAACTAGTAAGCCAAGA
TTGCCATTGGTTGAAAGTTTGGTTCGAGTGGAGTGCATCAACACGTGATGAAGTGTGGCCACTATTCGTAACGACAAACC
GCACCAACCAACTGCTGGTGCAAAACATGTTCATCAAAGCTATCGAACGTGGGGAAGTTTGTGACCAACATGAACCGGAA
CACTTGGCGAATCTGTTCCATGGTATTTGTTACTCTATCTTCGTACAAGCAAATCGCTCTAAGAGCGAAGCCGAGCTATC
AACACTCGTTAGTGCTTACCTAGATATGTTGTGCATCTACAACCGCGATCACTAA
ATGGACTCAATTGCAAAGAGACCTCGTACTAGGCTTTCCCCTCTAAAACGTAAACAGCAACTAATGGAAATCGCTCTTGA
AGTGTTTGCTCGTCGCGGCATTGGTCGTGGTGGTCACGCTGATATTGCAGAGATTGCTCAAGTTTCTGTTGCGACAGTAT
TTAACTACTTCCCAACTCGCGAAGACTTGGTGGATGAAGTTCTGAATCACGTGGTTCGTCAATTCTCGAACTTCTTATCA
GATAACATCGACTTAGACATTCATGCACGCGAGAACATCGCTAACATCACTAACGCAATGATTGAACTAGTAAGCCAAGA
TTGCCATTGGTTGAAAGTTTGGTTCGAGTGGAGTGCATCAACACGTGATGAAGTGTGGCCACTATTCGTAACGACAAACC
GCACCAACCAACTGCTGGTGCAAAACATGTTCATCAAAGCTATCGAACGTGGGGAAGTTTGTGACCAACATGAACCGGAA
CACTTGGCGAATCTGTTCCATGGTATTTGTTACTCTATCTTCGTACAAGCAAATCGCTCTAAGAGCGAAGCCGAGCTATC
AACACTCGTTAGTGCTTACCTAGATATGTTGTGCATCTACAACCGCGATCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
95.588 |
100 |
0.956 |
| hapR | Vibrio cholerae C6706 |
71.717 |
97.059 |
0.696 |
| hapR | Vibrio cholerae strain A1552 |
71.717 |
97.059 |
0.696 |