Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   GB851_RS02135 Genome accession   NZ_CP045141
Coordinates   423567..424271 (-) Length   234 a.a.
NCBI ID   WP_038311111.1    Uniprot ID   -
Organism   Kingella kingae strain F41215CHC     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418567..429271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GB851_RS02105 (GB851_02200) pgl 418588..419286 (+) 699 WP_003789578.1 6-phosphogluconolactonase -
  GB851_RS02110 (GB851_02205) - 419267..420271 (+) 1005 WP_003789579.1 glucokinase -
  GB851_RS02115 (GB851_02210) - 420335..420877 (-) 543 WP_164538065.1 type IV secretion protein Rhs -
  GB851_RS02120 (GB851_02215) aroG 420874..421926 (-) 1053 WP_038311114.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  GB851_RS02125 (GB851_02220) - 422187..422549 (-) 363 WP_003789582.1 hypothetical protein -
  GB851_RS02130 (GB851_02225) - 422679..423506 (-) 828 WP_038311505.1 undecaprenyl-diphosphate phosphatase -
  GB851_RS02135 (GB851_02230) dsbA2 423567..424271 (-) 705 WP_038311111.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  GB851_RS02140 (GB851_02235) - 424310..425170 (-) 861 WP_038311109.1 SPOR domain-containing protein -
  GB851_RS02145 (GB851_02240) - 425235..426029 (-) 795 WP_038306876.1 3'-5' exonuclease -
  GB851_RS02150 (GB851_02245) - 426182..426997 (+) 816 WP_003789592.1 DsbC family protein -
  GB851_RS02155 (GB851_02250) - 427197..427448 (+) 252 WP_003785591.1 BolA/IbaG family iron-sulfur metabolism protein -
  GB851_RS02160 (GB851_02255) - 427530..428438 (+) 909 WP_032133401.1 tyrosine-type recombinase/integrase -
  GB851_RS02165 (GB851_02260) - 428435..428878 (+) 444 WP_003789597.1 membrane protein -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25699.47 Da        Isoelectric Point: 8.4456

>NTDB_id=343688 GB851_RS02135 WP_038311111.1 423567..424271(-) (dsbA2) [Kingella kingae strain F41215CHC]
MLNKKSIAAALMALFVSVPALAATEGVDYKLAEVEVAPLQKDKIEVTEFFAYWCPHCYDLEPVIARHIKTFASDTVFRAE
HIVWDKQRDFGFARLAAAVKQSGTKIQANPFIFEAVIKQKVNLGNPAVLSQWLKAQTAFDGSKVQAAFDSFSNATQATQM
ESWTDQYAISGTPTVIVGGKYQVIFNNGYEAGMTTIDELIKKVREERGMKALAPKAATTPTHSFGASLVNSVNR

Nucleotide


Download         Length: 705 bp        

>NTDB_id=343688 GB851_RS02135 WP_038311111.1 423567..424271(-) (dsbA2) [Kingella kingae strain F41215CHC]
ATGTTGAATAAAAAAAGTATTGCCGCCGCATTGATGGCGTTGTTTGTATCTGTTCCTGCGTTGGCAGCCACCGAAGGCGT
GGACTATAAACTTGCCGAAGTGGAAGTTGCACCCTTGCAAAAAGACAAAATTGAAGTAACCGAATTTTTTGCATACTGGT
GTCCACATTGCTATGACCTAGAACCCGTTATTGCACGTCATATCAAAACCTTTGCCAGCGACACCGTATTCCGCGCGGAA
CACATTGTGTGGGATAAACAACGCGATTTTGGTTTTGCACGTCTTGCCGCAGCGGTGAAACAATCGGGTACAAAAATACA
AGCCAACCCATTTATTTTTGAAGCTGTAATTAAACAAAAAGTCAATTTAGGCAACCCAGCCGTTTTGTCGCAATGGCTCA
AAGCACAAACCGCATTCGATGGCAGCAAAGTGCAGGCTGCTTTTGATTCGTTCAGCAACGCCACACAAGCCACACAAATG
GAATCATGGACAGACCAATACGCCATTTCTGGCACACCAACCGTGATTGTGGGCGGCAAATACCAAGTTATTTTCAACAA
CGGCTACGAAGCAGGCATGACCACGATTGACGAACTCATCAAAAAAGTACGCGAAGAACGTGGCATGAAAGCCCTGGCAC
CCAAAGCCGCAACCACACCAACTCACAGCTTTGGCGCAAGTTTGGTTAATAGCGTAAATCGTTAA

Domains

Predicted by InterProScan.

Thioredoxin (Thioredoxin_4)

(41-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

53.005

78.205

0.415
  dsbA1 Neisseria meningitidis MC58

49.189

79.06

0.389