Detailed information
Bioinformatically predicted
Overview
| Name | tfoS | Type | Regulator |
| Locus tag | EPB59_RS03105 | Genome accession | NZ_CP035686 |
| Coordinates | 649819..653166 (+) | Length | 1115 a.a. |
| NCBI ID | WP_195707088.1 | Uniprot ID | - |
| Organism | Vibrio metoecus strain 2011V-1169 | ||
| Function | chitin sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 644819..658166
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPB59_RS03080 | sucC | 644945..646111 (+) | 1167 | WP_001048577.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| EPB59_RS03085 | sucD | 646111..646983 (+) | 873 | WP_000025475.1 | succinate--CoA ligase subunit alpha | - |
| EPB59_RS03090 | znuB | 647090..647872 (-) | 783 | WP_154171528.1 | zinc ABC transporter permease subunit ZnuB | - |
| EPB59_RS03095 | znuC | 647865..648652 (-) | 788 | Protein_592 | zinc ABC transporter ATP-binding protein ZnuC | - |
| EPB59_RS03100 | znuA | 648735..649619 (+) | 885 | WP_154171529.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| EPB59_RS03105 | tfoS | 649819..653166 (+) | 3348 | WP_195707088.1 | helix-turn-helix domain-containing protein | Regulator |
| EPB59_RS03110 | - | 653710..653940 (+) | 231 | WP_055050947.1 | FeoA family protein | - |
| EPB59_RS03115 | feoB | 653937..656213 (+) | 2277 | WP_154171530.1 | Fe(2+) transporter permease subunit FeoB | - |
| EPB59_RS03120 | - | 656210..656440 (+) | 231 | WP_055050949.1 | FeoC-like transcriptional regulator | - |
| EPB59_RS03125 | - | 656545..656982 (-) | 438 | WP_154171531.1 | HIT domain-containing protein | - |
Sequence
Protein
Download Length: 1115 a.a. Molecular weight: 126714.17 Da Isoelectric Point: 7.1020
>NTDB_id=343640 EPB59_RS03105 WP_195707088.1 649819..653166(+) (tfoS) [Vibrio metoecus strain 2011V-1169]
MFRTLLYSFLLNLIFPSLVLALDKSMSVFYPLPIQEQGKVIVAQNLYLGTDGGIWMHDVHGKVMYFDGQNILPRRGSVLP
QTSSHIVYANSAFWTFEQHELFRTYPAGHKELMLSLTPGTQINQIGSSNGMIWMTDNDNFYSYEIRSGRVSTLSLHELYQ
LNSASTVVINDAQFLVSKWALATNVGVYLSDEQGFSHVKKSGKHFVQKLYFSHKRRELLVGSKRGALIIDIENKRSLPDR
IGSSHVLSIAETEKEYWVGTEEGLYVYSFITGKVVQLENNSNNEYALLGKKIYAMVNDFQGGMWIATDKGVFYYSLFGQQ
FTRYPTQALSNDGSKAQISKIKALNSDGDYLAITQQGLYNFNVADDLRKHLIYPGKINDFAINGENIWIATDKGLARYNL
SRRSIDTPHLPLALLQTSVEHLTIDGSGNLWGSSNHQIWSYSIIQQSFVDYGSEWIVKQFSPSRITLLAAVEQGIVIGTE
HGAYSLFGKQIRFDFSSHRYGEIVQVAQNALGDVWIIGAYGVFLWHKDKPEAVPVELIEENIQPLCIAESKQGMWFISSQ
GISHYSDQGQLNKNYSAPYGLISHEFLPASCAVGEEKESSSLVIGSQLGIVKVNTEELAVSNLPNIQVMFSQVSVNHRPK
LLGYRTPHPLKINYGDAISFQFGALPSARSQSLEYKLNDDQQWQRFDWTLLSFDKLLPGKYRLKVRSANPTQRYRTEALF
DFEVMEPWYMTSVAIVGYVVALFVLLAVAFWWRTRMIVGANRKLKAQVDLKTSQLRHQSKIVLSNNHQLRKQLQLHHNLL
GKVLESVDPSLRHLSSYAKVRGWNEFDAPLNKVKQELAQLHFMHRGDAEESKFHDLHLLIESALKSWQEEYSKAAIKLIY
QGETRFIEVRQFNLDVLFNAILTDAIKRLYKYQELQIQLEARDEQAVLVFSDFGSPIQNLGSMLVTLTGFGTYPLQELIS
RSGGELRVFVLKERNVIELEWPLASIPEIESFKQEGAEIEQKSAIDDVEKEWLSKLEKLIEQNYSDPNFTTSTAAQSLYV
SERSLQRRFKAATGKTFKESLNEVRLEKACQSLLSGAKIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQES
MFRTLLYSFLLNLIFPSLVLALDKSMSVFYPLPIQEQGKVIVAQNLYLGTDGGIWMHDVHGKVMYFDGQNILPRRGSVLP
QTSSHIVYANSAFWTFEQHELFRTYPAGHKELMLSLTPGTQINQIGSSNGMIWMTDNDNFYSYEIRSGRVSTLSLHELYQ
LNSASTVVINDAQFLVSKWALATNVGVYLSDEQGFSHVKKSGKHFVQKLYFSHKRRELLVGSKRGALIIDIENKRSLPDR
IGSSHVLSIAETEKEYWVGTEEGLYVYSFITGKVVQLENNSNNEYALLGKKIYAMVNDFQGGMWIATDKGVFYYSLFGQQ
FTRYPTQALSNDGSKAQISKIKALNSDGDYLAITQQGLYNFNVADDLRKHLIYPGKINDFAINGENIWIATDKGLARYNL
SRRSIDTPHLPLALLQTSVEHLTIDGSGNLWGSSNHQIWSYSIIQQSFVDYGSEWIVKQFSPSRITLLAAVEQGIVIGTE
HGAYSLFGKQIRFDFSSHRYGEIVQVAQNALGDVWIIGAYGVFLWHKDKPEAVPVELIEENIQPLCIAESKQGMWFISSQ
GISHYSDQGQLNKNYSAPYGLISHEFLPASCAVGEEKESSSLVIGSQLGIVKVNTEELAVSNLPNIQVMFSQVSVNHRPK
LLGYRTPHPLKINYGDAISFQFGALPSARSQSLEYKLNDDQQWQRFDWTLLSFDKLLPGKYRLKVRSANPTQRYRTEALF
DFEVMEPWYMTSVAIVGYVVALFVLLAVAFWWRTRMIVGANRKLKAQVDLKTSQLRHQSKIVLSNNHQLRKQLQLHHNLL
GKVLESVDPSLRHLSSYAKVRGWNEFDAPLNKVKQELAQLHFMHRGDAEESKFHDLHLLIESALKSWQEEYSKAAIKLIY
QGETRFIEVRQFNLDVLFNAILTDAIKRLYKYQELQIQLEARDEQAVLVFSDFGSPIQNLGSMLVTLTGFGTYPLQELIS
RSGGELRVFVLKERNVIELEWPLASIPEIESFKQEGAEIEQKSAIDDVEKEWLSKLEKLIEQNYSDPNFTTSTAAQSLYV
SERSLQRRFKAATGKTFKESLNEVRLEKACQSLLSGAKIAQVAFDCGFNDPSYFSQRFKHHFGLSPSQFIEDQES
Nucleotide
Download Length: 3348 bp
>NTDB_id=343640 EPB59_RS03105 WP_195707088.1 649819..653166(+) (tfoS) [Vibrio metoecus strain 2011V-1169]
GTGTTTCGCACATTGTTATACAGCTTCTTGCTGAATCTTATTTTTCCTTCATTGGTGTTGGCCTTAGATAAGTCAATGTC
GGTTTTTTATCCTTTGCCGATCCAAGAGCAGGGGAAAGTCATTGTTGCTCAAAACCTCTATCTTGGAACGGACGGCGGTA
TCTGGATGCATGATGTGCATGGAAAAGTCATGTATTTTGATGGGCAAAATATCCTGCCACGTCGAGGTTCTGTACTTCCG
CAAACGTCGAGTCACATTGTTTACGCAAATAGTGCTTTCTGGACATTTGAACAACATGAATTGTTTCGAACCTATCCTGC
GGGGCACAAAGAGTTGATGTTAAGCCTCACACCTGGAACCCAAATCAATCAGATTGGTTCATCGAACGGCATGATTTGGA
TGACGGATAATGACAATTTCTACAGCTATGAAATTCGAAGTGGGCGAGTATCGACGCTTTCACTGCACGAGTTATATCAG
TTGAATAGTGCTAGTACGGTTGTCATAAACGATGCGCAGTTCTTGGTTTCAAAGTGGGCGCTAGCGACGAATGTTGGTGT
TTATTTGTCTGATGAGCAAGGCTTTTCTCATGTGAAAAAATCCGGAAAACATTTTGTTCAGAAGCTTTATTTTTCTCATA
AACGCCGAGAGTTATTAGTTGGCTCTAAGCGCGGTGCATTAATTATTGATATTGAGAACAAGCGCTCACTACCCGATCGA
ATTGGCTCATCGCATGTTCTATCCATTGCGGAGACAGAAAAGGAGTACTGGGTTGGCACTGAAGAGGGGCTTTATGTTTA
CTCCTTTATCACGGGAAAAGTAGTTCAATTAGAAAATAATAGTAATAATGAGTACGCTTTACTGGGTAAGAAAATCTATG
CAATGGTGAATGATTTTCAAGGGGGAATGTGGATCGCAACTGATAAAGGTGTGTTTTACTATTCTTTATTTGGGCAGCAG
TTTACGCGTTACCCTACTCAAGCATTATCGAACGATGGTAGTAAAGCACAGATCAGTAAAATCAAGGCATTAAACTCTGA
TGGTGATTATTTGGCCATCACACAACAAGGGTTGTATAATTTCAATGTCGCTGATGATTTACGTAAACACCTCATCTATC
CCGGTAAGATCAACGACTTTGCTATCAACGGTGAGAATATATGGATTGCAACAGACAAAGGGTTGGCTCGTTATAATCTT
TCTCGTCGTAGTATCGATACTCCTCATCTACCGCTAGCATTGCTACAAACATCCGTTGAACACCTCACTATTGACGGCAG
CGGTAACTTATGGGGTTCAAGTAATCATCAGATTTGGTCATATTCAATCATTCAACAAAGCTTTGTGGATTATGGTTCGG
AATGGATTGTTAAACAATTTTCACCTTCTCGAATCACCCTTCTTGCTGCTGTAGAGCAAGGCATTGTTATTGGTACTGAG
CATGGTGCTTACTCTTTATTTGGAAAACAGATTCGTTTCGATTTTTCTAGTCATCGCTATGGTGAAATAGTGCAAGTAGC
GCAAAATGCTTTGGGTGATGTTTGGATTATTGGCGCTTATGGCGTTTTTTTGTGGCATAAAGATAAACCTGAAGCAGTGC
CAGTAGAATTAATTGAAGAGAATATCCAACCACTGTGTATTGCTGAATCCAAGCAAGGTATGTGGTTTATTTCGTCACAG
GGAATAAGTCACTATAGCGACCAAGGTCAATTGAATAAAAATTATAGTGCCCCTTATGGCTTAATCAGCCATGAATTTCT
TCCCGCCTCTTGCGCAGTAGGCGAAGAAAAAGAAAGTTCATCTTTGGTTATTGGATCGCAATTGGGAATAGTGAAAGTAA
ACACGGAAGAGCTAGCAGTATCGAATTTACCTAATATTCAGGTGATGTTTAGCCAAGTGAGTGTCAACCATAGGCCTAAG
CTACTGGGGTATCGTACACCTCATCCACTGAAGATTAACTATGGCGATGCGATTAGTTTCCAGTTTGGTGCTCTACCTTC
TGCTCGTAGCCAATCGTTAGAATATAAATTGAACGACGATCAACAGTGGCAACGATTTGATTGGACACTATTGAGTTTTG
ATAAGTTATTACCCGGTAAATATCGCCTAAAAGTACGTAGTGCAAACCCTACTCAGCGCTATCGAACGGAAGCCTTGTTT
GATTTTGAAGTTATGGAACCTTGGTACATGACTTCTGTGGCCATTGTTGGTTATGTTGTGGCTTTATTTGTGCTACTTGC
CGTAGCGTTTTGGTGGCGAACTCGCATGATTGTTGGCGCTAACCGAAAGTTAAAGGCACAAGTTGATTTGAAAACGAGTC
AATTGCGCCATCAGAGTAAAATAGTATTGAGTAATAACCATCAATTACGAAAACAACTGCAACTTCACCACAATTTACTA
GGAAAGGTTTTAGAAAGCGTAGATCCATCGCTGCGGCATCTCTCTTCGTATGCCAAAGTACGAGGCTGGAATGAGTTTGA
TGCGCCTCTGAACAAAGTAAAGCAAGAATTAGCACAATTACACTTTATGCATCGCGGTGATGCTGAAGAGAGTAAGTTTC
ATGACTTACACTTATTGATAGAGTCAGCCTTAAAAAGTTGGCAGGAAGAGTACAGTAAAGCGGCGATCAAGCTTATTTAC
CAAGGTGAAACACGCTTTATCGAAGTCCGCCAATTTAATCTTGATGTACTGTTTAACGCGATTTTGACGGATGCGATTAA
ACGACTTTATAAATATCAAGAATTACAGATCCAACTAGAAGCGAGAGATGAACAAGCCGTTCTCGTTTTTTCTGATTTCG
GTTCACCGATTCAAAACCTTGGATCAATGTTGGTGACATTAACAGGTTTTGGAACCTATCCATTACAGGAGCTCATTAGC
CGAAGTGGGGGGGAACTGCGAGTATTCGTTCTGAAAGAGCGCAATGTGATTGAGCTCGAGTGGCCACTCGCCTCGATTCC
AGAGATCGAATCGTTCAAGCAAGAAGGGGCTGAAATCGAACAGAAGTCAGCAATTGATGATGTGGAAAAAGAGTGGTTAA
GTAAGCTAGAAAAGCTTATTGAGCAAAATTACAGTGATCCTAACTTTACGACATCAACGGCAGCACAATCCCTCTATGTT
TCCGAGCGTAGTTTGCAGCGTCGCTTCAAAGCTGCAACAGGAAAAACATTTAAAGAATCACTGAATGAGGTACGTTTGGA
GAAAGCCTGCCAGAGTTTATTGAGTGGGGCAAAAATTGCTCAGGTGGCCTTTGACTGTGGATTTAATGACCCTTCCTACT
TTAGCCAACGTTTTAAACATCACTTTGGTTTATCTCCGAGTCAATTTATTGAAGATCAAGAATCTTAG
GTGTTTCGCACATTGTTATACAGCTTCTTGCTGAATCTTATTTTTCCTTCATTGGTGTTGGCCTTAGATAAGTCAATGTC
GGTTTTTTATCCTTTGCCGATCCAAGAGCAGGGGAAAGTCATTGTTGCTCAAAACCTCTATCTTGGAACGGACGGCGGTA
TCTGGATGCATGATGTGCATGGAAAAGTCATGTATTTTGATGGGCAAAATATCCTGCCACGTCGAGGTTCTGTACTTCCG
CAAACGTCGAGTCACATTGTTTACGCAAATAGTGCTTTCTGGACATTTGAACAACATGAATTGTTTCGAACCTATCCTGC
GGGGCACAAAGAGTTGATGTTAAGCCTCACACCTGGAACCCAAATCAATCAGATTGGTTCATCGAACGGCATGATTTGGA
TGACGGATAATGACAATTTCTACAGCTATGAAATTCGAAGTGGGCGAGTATCGACGCTTTCACTGCACGAGTTATATCAG
TTGAATAGTGCTAGTACGGTTGTCATAAACGATGCGCAGTTCTTGGTTTCAAAGTGGGCGCTAGCGACGAATGTTGGTGT
TTATTTGTCTGATGAGCAAGGCTTTTCTCATGTGAAAAAATCCGGAAAACATTTTGTTCAGAAGCTTTATTTTTCTCATA
AACGCCGAGAGTTATTAGTTGGCTCTAAGCGCGGTGCATTAATTATTGATATTGAGAACAAGCGCTCACTACCCGATCGA
ATTGGCTCATCGCATGTTCTATCCATTGCGGAGACAGAAAAGGAGTACTGGGTTGGCACTGAAGAGGGGCTTTATGTTTA
CTCCTTTATCACGGGAAAAGTAGTTCAATTAGAAAATAATAGTAATAATGAGTACGCTTTACTGGGTAAGAAAATCTATG
CAATGGTGAATGATTTTCAAGGGGGAATGTGGATCGCAACTGATAAAGGTGTGTTTTACTATTCTTTATTTGGGCAGCAG
TTTACGCGTTACCCTACTCAAGCATTATCGAACGATGGTAGTAAAGCACAGATCAGTAAAATCAAGGCATTAAACTCTGA
TGGTGATTATTTGGCCATCACACAACAAGGGTTGTATAATTTCAATGTCGCTGATGATTTACGTAAACACCTCATCTATC
CCGGTAAGATCAACGACTTTGCTATCAACGGTGAGAATATATGGATTGCAACAGACAAAGGGTTGGCTCGTTATAATCTT
TCTCGTCGTAGTATCGATACTCCTCATCTACCGCTAGCATTGCTACAAACATCCGTTGAACACCTCACTATTGACGGCAG
CGGTAACTTATGGGGTTCAAGTAATCATCAGATTTGGTCATATTCAATCATTCAACAAAGCTTTGTGGATTATGGTTCGG
AATGGATTGTTAAACAATTTTCACCTTCTCGAATCACCCTTCTTGCTGCTGTAGAGCAAGGCATTGTTATTGGTACTGAG
CATGGTGCTTACTCTTTATTTGGAAAACAGATTCGTTTCGATTTTTCTAGTCATCGCTATGGTGAAATAGTGCAAGTAGC
GCAAAATGCTTTGGGTGATGTTTGGATTATTGGCGCTTATGGCGTTTTTTTGTGGCATAAAGATAAACCTGAAGCAGTGC
CAGTAGAATTAATTGAAGAGAATATCCAACCACTGTGTATTGCTGAATCCAAGCAAGGTATGTGGTTTATTTCGTCACAG
GGAATAAGTCACTATAGCGACCAAGGTCAATTGAATAAAAATTATAGTGCCCCTTATGGCTTAATCAGCCATGAATTTCT
TCCCGCCTCTTGCGCAGTAGGCGAAGAAAAAGAAAGTTCATCTTTGGTTATTGGATCGCAATTGGGAATAGTGAAAGTAA
ACACGGAAGAGCTAGCAGTATCGAATTTACCTAATATTCAGGTGATGTTTAGCCAAGTGAGTGTCAACCATAGGCCTAAG
CTACTGGGGTATCGTACACCTCATCCACTGAAGATTAACTATGGCGATGCGATTAGTTTCCAGTTTGGTGCTCTACCTTC
TGCTCGTAGCCAATCGTTAGAATATAAATTGAACGACGATCAACAGTGGCAACGATTTGATTGGACACTATTGAGTTTTG
ATAAGTTATTACCCGGTAAATATCGCCTAAAAGTACGTAGTGCAAACCCTACTCAGCGCTATCGAACGGAAGCCTTGTTT
GATTTTGAAGTTATGGAACCTTGGTACATGACTTCTGTGGCCATTGTTGGTTATGTTGTGGCTTTATTTGTGCTACTTGC
CGTAGCGTTTTGGTGGCGAACTCGCATGATTGTTGGCGCTAACCGAAAGTTAAAGGCACAAGTTGATTTGAAAACGAGTC
AATTGCGCCATCAGAGTAAAATAGTATTGAGTAATAACCATCAATTACGAAAACAACTGCAACTTCACCACAATTTACTA
GGAAAGGTTTTAGAAAGCGTAGATCCATCGCTGCGGCATCTCTCTTCGTATGCCAAAGTACGAGGCTGGAATGAGTTTGA
TGCGCCTCTGAACAAAGTAAAGCAAGAATTAGCACAATTACACTTTATGCATCGCGGTGATGCTGAAGAGAGTAAGTTTC
ATGACTTACACTTATTGATAGAGTCAGCCTTAAAAAGTTGGCAGGAAGAGTACAGTAAAGCGGCGATCAAGCTTATTTAC
CAAGGTGAAACACGCTTTATCGAAGTCCGCCAATTTAATCTTGATGTACTGTTTAACGCGATTTTGACGGATGCGATTAA
ACGACTTTATAAATATCAAGAATTACAGATCCAACTAGAAGCGAGAGATGAACAAGCCGTTCTCGTTTTTTCTGATTTCG
GTTCACCGATTCAAAACCTTGGATCAATGTTGGTGACATTAACAGGTTTTGGAACCTATCCATTACAGGAGCTCATTAGC
CGAAGTGGGGGGGAACTGCGAGTATTCGTTCTGAAAGAGCGCAATGTGATTGAGCTCGAGTGGCCACTCGCCTCGATTCC
AGAGATCGAATCGTTCAAGCAAGAAGGGGCTGAAATCGAACAGAAGTCAGCAATTGATGATGTGGAAAAAGAGTGGTTAA
GTAAGCTAGAAAAGCTTATTGAGCAAAATTACAGTGATCCTAACTTTACGACATCAACGGCAGCACAATCCCTCTATGTT
TCCGAGCGTAGTTTGCAGCGTCGCTTCAAAGCTGCAACAGGAAAAACATTTAAAGAATCACTGAATGAGGTACGTTTGGA
GAAAGCCTGCCAGAGTTTATTGAGTGGGGCAAAAATTGCTCAGGTGGCCTTTGACTGTGGATTTAATGACCCTTCCTACT
TTAGCCAACGTTTTAAACATCACTTTGGTTTATCTCCGAGTCAATTTATTGAAGATCAAGAATCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tfoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
81.272 |
100 |
0.813 |