Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   FQU82_RS01680 Genome accession   NZ_CP045110
Coordinates   315918..316553 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 310918..321553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQU82_RS01665 (FQU82_00305) - 311706..312890 (+) 1185 WP_000939110.1 S41 family peptidase -
  FQU82_RS01670 (FQU82_00306) - 312894..314315 (-) 1422 WP_000840559.1 sigma-54-dependent transcriptional regulator -
  FQU82_RS01675 (FQU82_00307) pilS 314339..315907 (-) 1569 WP_001160331.1 sensor histidine kinase Regulator
  FQU82_RS01680 (FQU82_00308) letA 315918..316553 (-) 636 WP_000633799.1 response regulator transcription factor GacA Regulator
  FQU82_RS01685 (FQU82_00309) pbpG 316766..317812 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  FQU82_RS01690 (FQU82_00310) thrC 317921..319060 (-) 1140 WP_000063594.1 threonine synthase -
  FQU82_RS01695 (FQU82_00311) - 319116..320417 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  FQU82_RS01700 (FQU82_00312) - 320662..321477 (-) 816 WP_000011163.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=343602 FQU82_RS01680 WP_000633799.1 315918..316553(-) (letA) [Acinetobacter baumannii strain ATCC 19606]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=343602 FQU82_RS01680 WP_000633799.1 315918..316553(-) (letA) [Acinetobacter baumannii strain ATCC 19606]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment