Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | F1716_RS03985 | Genome accession | NZ_CP045048 |
| Coordinates | 680595..680978 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni subsp. jejuni strain NADC 20827 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 675595..685978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1716_RS03965 (F1716_03990) | - | 675674..677608 (-) | 1935 | WP_070317282.1 | ribonuclease R family protein | - |
| F1716_RS03970 (F1716_03995) | ilvC | 677727..678749 (+) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| F1716_RS03975 (F1716_04000) | - | 678753..679835 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| F1716_RS03980 (F1716_04005) | dprA | 679825..680598 (+) | 774 | WP_070317309.1 | DNA-processing protein DprA | Machinery gene |
| F1716_RS03985 (F1716_04010) | dprB | 680595..680978 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| F1716_RS03990 (F1716_04015) | - | 681007..681846 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| F1716_RS03995 (F1716_04020) | msrA | 682022..682519 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| F1716_RS04000 (F1716_04025) | ppa | 682561..683079 (-) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| F1716_RS04005 (F1716_04030) | adk | 683089..683667 (-) | 579 | WP_032590860.1 | adenylate kinase | - |
| F1716_RS04010 (F1716_04035) | aspS | 683664..685415 (-) | 1752 | WP_052777314.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=343558 F1716_RS03985 WP_002852281.1 680595..680978(+) (dprB) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=343558 F1716_RS03985 WP_002852281.1 680595..680978(+) (dprB) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |