Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE1441   Type   Regulator
Locus tag   F1716_RS02055 Genome accession   NZ_CP045048
Coordinates   330985..331626 (-) Length   213 a.a.
NCBI ID   WP_153257473.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain NADC 20827     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 325985..336626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1716_RS02010 (F1716_02025) - 326200..326649 (+) 450 WP_153257470.1 hypothetical protein -
  F1716_RS02015 (F1716_02030) - 326662..327297 (+) 636 WP_057030888.1 DUF4376 domain-containing protein -
  F1716_RS02020 (F1716_02035) - 327294..327758 (+) 465 WP_002801917.1 hypothetical protein -
  F1716_RS02025 (F1716_02040) - 327748..328119 (+) 372 WP_002801918.1 DUF1353 domain-containing protein -
  F1716_RS02030 (F1716_02045) - 328116..329399 (+) 1284 WP_057981351.1 hypothetical protein -
  F1716_RS02035 (F1716_02050) - 329448..329909 (+) 462 WP_153257471.1 DUF5675 family protein -
  F1716_RS02040 (F1716_02055) - 330139..330558 (+) 420 WP_153257472.1 hypothetical protein -
  F1716_RS02045 (F1716_02060) - 330476..330673 (+) 198 WP_002913413.1 hypothetical protein -
  F1716_RS02050 (F1716_02065) - 330687..330968 (-) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  F1716_RS02055 (F1716_02070) CJE1441 330985..331626 (-) 642 WP_153257473.1 DNA/RNA non-specific endonuclease Regulator
  F1716_RS02060 (F1716_02075) - 331632..332294 (-) 663 WP_002870274.1 S24/S26 family peptidase -
  F1716_RS02065 (F1716_02080) - 332529..333182 (-) 654 WP_002870336.1 hypothetical protein -
  F1716_RS02070 (F1716_02085) - 333387..333590 (+) 204 WP_002870299.1 hypothetical protein -
  F1716_RS02075 (F1716_02090) - 333587..333871 (+) 285 WP_153257474.1 hypothetical protein -
  F1716_RS02080 (F1716_02095) - 334302..335033 (+) 732 WP_153257475.1 phage regulatory protein/antirepressor Ant -
  F1716_RS02085 (F1716_02100) - 335086..335373 (+) 288 WP_002787279.1 YopX family protein -
  F1716_RS02090 (F1716_02105) - 335430..335693 (+) 264 WP_002787281.1 hypothetical protein -
  F1716_RS02095 (F1716_02110) - 335659..335889 (+) 231 WP_002787283.1 hypothetical protein -

Sequence


Protein


Download         Length: 213 a.a.        Molecular weight: 25007.42 Da        Isoelectric Point: 9.9709

>NTDB_id=343552 F1716_RS02055 WP_153257473.1 330985..331626(-) (CJE1441) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFAKQNCSQVLDKFYYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFEDDTN
IPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVLNLVN
YDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF

Nucleotide


Download         Length: 642 bp        

>NTDB_id=343552 F1716_RS02055 WP_153257473.1 330985..331626(-) (CJE1441) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTGCTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATGATTATTCTTTAAAAGGCACTAAAG
CCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAAGATGATACAAAT
ATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCTTTCTAATGCTTC
AATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCACAAATCAATCAAA
GAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTAAATTTGGTTAAT
TATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAAAGGTGATAATTT
TAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAATGTGACAATTTTT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

97.696

100

0.995

  CJE0566 Campylobacter jejuni RM1221

89.302

100

0.901


Multiple sequence alignment