Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EWG56_RS11395 | Genome accession | NZ_CP035671 |
| Coordinates | 2256032..2256427 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain VB31683 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2251032..2261427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EWG56_RS11360 (EWG56_11360) | - | 2252177..2252581 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| EWG56_RS11370 (EWG56_11370) | - | 2253033..2253125 (+) | 93 | WP_031789435.1 | hypothetical protein | - |
| EWG56_RS11375 (EWG56_11375) | - | 2253257..2253490 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| EWG56_RS11380 (EWG56_11380) | murA | 2253601..2254866 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EWG56_RS11385 (EWG56_11385) | fabZ | 2254900..2255340 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EWG56_RS11390 (EWG56_11390) | - | 2255398..2255838 (-) | 441 | WP_000846750.1 | YwpF-like family protein | - |
| EWG56_RS11395 (EWG56_11395) | ssb | 2256032..2256427 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| EWG56_RS11400 (EWG56_11400) | sceD | 2256816..2257511 (+) | 696 | WP_000752002.1 | lytic transglycosylase SceD | - |
| EWG56_RS11405 (EWG56_11405) | tenA | 2257898..2258587 (+) | 690 | WP_000396069.1 | thiaminase II | - |
| EWG56_RS11410 (EWG56_11410) | thiD | 2258580..2259410 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EWG56_RS11415 (EWG56_11415) | thiM | 2259394..2260185 (+) | 792 | WP_001108482.1 | hydroxyethylthiazole kinase | - |
| EWG56_RS11420 (EWG56_11420) | thiE | 2260187..2260828 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=343484 EWG56_RS11395 WP_000932694.1 2256032..2256427(+) (ssb) [Staphylococcus aureus strain VB31683]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=343484 EWG56_RS11395 WP_000932694.1 2256032..2256427(+) (ssb) [Staphylococcus aureus strain VB31683]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |