Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   F7R97_RS01180 Genome accession   NZ_CP044517
Coordinates   254718..255353 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain 31FS3-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 249718..260353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7R97_RS01165 (F7R97_01175) - 250505..251689 (+) 1185 WP_133238364.1 S41 family peptidase -
  F7R97_RS01170 (F7R97_01180) - 251693..253114 (-) 1422 WP_133238365.1 sigma-54-dependent transcriptional regulator -
  F7R97_RS01175 (F7R97_01185) pilS 253139..254707 (-) 1569 WP_001160333.1 sensor histidine kinase Regulator
  F7R97_RS01180 (F7R97_01190) letA 254718..255353 (-) 636 WP_000633799.1 response regulator Regulator
  F7R97_RS01185 (F7R97_01195) pbpG 255566..256612 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  F7R97_RS01190 (F7R97_01200) thrC 256719..257858 (-) 1140 WP_000063593.1 threonine synthase -
  F7R97_RS01195 (F7R97_01205) - 257914..259215 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  F7R97_RS01200 (F7R97_01210) - 259460..260275 (-) 816 WP_000011163.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=343296 F7R97_RS01180 WP_000633799.1 254718..255353(-) (letA) [Acinetobacter baumannii strain 31FS3-2]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=343296 F7R97_RS01180 WP_000633799.1 254718..255353(-) (letA) [Acinetobacter baumannii strain 31FS3-2]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55