Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   F8M43_RS19430 Genome accession   NZ_CP044498
Coordinates   3716135..3716509 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain ms-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3711135..3721509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F8M43_RS19405 - 3711299..3711460 (-) 162 WP_003227632.1 hypothetical protein -
  F8M43_RS19410 glpX 3711675..3712640 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  F8M43_RS19415 murAB 3712671..3713960 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  F8M43_RS19420 fsa 3714339..3714977 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  F8M43_RS19425 fbaA 3715097..3715954 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  F8M43_RS19430 letA 3716135..3716509 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  F8M43_RS19435 ywjG 3716675..3717196 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  F8M43_RS19440 pyrG 3717278..3718885 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  F8M43_RS19445 rpoE 3719127..3719648 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  F8M43_RS19450 acdA 3719831..3720970 (-) 1140 WP_014478272.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=343277 F8M43_RS19430 WP_003227621.1 3716135..3716509(-) (letA) [Bacillus subtilis strain ms-2]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=343277 F8M43_RS19430 WP_003227621.1 3716135..3716509(-) (letA) [Bacillus subtilis strain ms-2]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363