Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   SACTE_RS13925 Genome accession   NC_015953
Coordinates   3158070..3159194 (+) Length   374 a.a.
NCBI ID   WP_026359248.1    Uniprot ID   A0ABU2RVJ8
Organism   Streptomyces sp. SirexAA-E     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3153070..3164194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SACTE_RS13910 (SACTE_2806) - 3153763..3154602 (+) 840 WP_014046666.1 hypothetical protein -
  SACTE_RS13915 (SACTE_2807) - 3154639..3156441 (-) 1803 WP_014046667.1 hypothetical protein -
  SACTE_RS13920 (SACTE_2808) radA/sms 3156577..3157989 (+) 1413 WP_014046668.1 DNA repair protein RadA Machinery gene
  SACTE_RS13925 (SACTE_2809) disA 3158070..3159194 (+) 1125 WP_026359248.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  SACTE_RS13930 (SACTE_2810) - 3159234..3160082 (-) 849 WP_202434226.1 hypothetical protein -
  SACTE_RS13935 (SACTE_2811) - 3160343..3161245 (+) 903 WP_014046671.1 A/G-specific adenine glycosylase -
  SACTE_RS13940 (SACTE_2812) - 3161464..3162048 (+) 585 WP_014046672.1 SigE family RNA polymerase sigma factor -
  SACTE_RS13945 (SACTE_2813) - 3162036..3162770 (+) 735 WP_014046673.1 hypothetical protein -
  SACTE_RS13950 (SACTE_2814) cseB 3162781..3163491 (+) 711 WP_014046674.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40150.01 Da        Isoelectric Point: 5.0137

>NTDB_id=34311 SACTE_RS13925 WP_026359248.1 3158070..3159194(+) (disA) [Streptomyces sp. SirexAA-E]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDAGIPTEETGTRHRTADRVSKACGFPVVSVSQSMHLIALYVHGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRLIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALGELDTLTHTELLELPVAARALGYSGSPESLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=34311 SACTE_RS13925 WP_026359248.1 3158070..3159194(+) (disA) [Streptomyces sp. SirexAA-E]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACGGGTAACGAGGCGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCGCCCGGAACGGCCCTCCGTGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGAGGGCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCCATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGGCCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCGGGATCCCCACCGAGGAGACGGGCACCCGTCACCGCACGGCGGACCGCGTCTCGAAGGCGTGCGGTTTCCCCG
TGGTCTCGGTCTCCCAGTCGATGCATCTGATCGCGCTGTACGTGCACGGGGAGCGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCCGGGACGCTCTC
GGCCCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTCGCCCAGCGTCTGGAGATGGTCCGCCTGATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTCGGCACCGACGGCCGCCTTCTGGCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGGGAGCTGGTCGTCCGCGACTACGTCCCGGAACCGACCGCCAAGCGGTCGCGGACGGTCGCGGA
GGCGCTGGGCGAGCTCGACACGCTCACCCACACCGAGCTGCTGGAACTTCCCGTCGCGGCCCGCGCCTTGGGCTACAGCG
GGTCACCGGAGTCGCTGGACTCGGCGGTGTCGCCGAGGGGCTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGTCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
CGGGGTCGGCGAGGCCCGCGCCCGCAGCGTGCGCGAAGGACTCTCGCGCCTGGCGGAGTCGTCGATCCTCGAACGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment