Detailed information NTG0343087

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: F8B64_RS01625
• Genome accession: NZ_CP044497
• Coordinates: 323105..324340 (-)
• Length: 411 a.a.
• NCBI ID: WP_005658618.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain PittGG
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 318105..329340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F8B64_RS01590 (F8B64_01590)	-	318656..319276 (-)	621	WP_041174864.1	YigZ family protein	-
F8B64_RS01595 (F8B64_01595)	tusA	319391..319630 (+)	240	WP_005665561.1	sulfurtransferase TusA	-
F8B64_RS01600 (F8B64_01600)	htpX	319672..320526 (-)	855	WP_162837812.1	protease HtpX	-
F8B64_RS01605 (F8B64_01605)	-	320690..321079 (-)	390	WP_012055182.1	RidA family protein	-
F8B64_RS01610 (F8B64_01610)	-	321136..321888 (-)	753	WP_012055181.1	VacJ family lipoprotein	-
F8B64_RS01615 (F8B64_01615)	nusG	321986..322543 (-)	558	WP_005648601.1	transcription termination/antitermination protein NusG	-
F8B64_RS01620 (F8B64_01620)	secE	322545..322961 (-)	417	WP_005648602.1	preprotein translocase subunit SecE	-
F8B64_RS01625 (F8B64_01625)	clpX	323105..324340 (-)	1236	WP_005658618.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
F8B64_RS01630 (F8B64_01630)	clpP	324350..324961 (-)	612	WP_257003823.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
F8B64_RS01635 (F8B64_01635)	tig	325054..326352 (-)	1299	WP_012055180.1	trigger factor	-

Sequence

Protein

• Length: 411 a.a.
• Molecular weight: 45610.20 Da
• Isoelectric Point: 4.7350

>NTDB_id=343087 F8B64_RS01625 WP_005658618.1 323105..324340(-) (clpX) [Haemophilus influenzae strain PittGG]
MTDKDKDLHCSFCGKEKGEVDKLIAGTGGYICNECIELCHSMLEESNDENLEESAVENKDKLPTPHEIRAHLDDYVIGQD
YAKKVLSVAVYNHYKRLRTNYESNDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVL
QKLLQNCEYDTEKAEKGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTIASIPPQGGRKHPQQEMVKLDTSK
ILFICGGAFAGLDKIIDKRTQTSTSIGFNAKVEKDEKQQSLSELFRQVEPDDLMKFGLIPEFIGRLPMIAPLSELDEDAL
IQILTKPKNALIKQYQALFGLEKVELDFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDLPSLENLQKVIVDEST
IVDNLAPKLEY

Nucleotide

• Length: 1236 bp

>NTDB_id=343087 F8B64_RS01625 WP_005658618.1 323105..324340(-) (clpX) [Haemophilus influenzae strain PittGG]
ATGACAGACAAAGATAAAGATTTGCACTGCTCTTTTTGCGGAAAAGAAAAAGGCGAAGTAGATAAATTAATTGCTGGCAC
AGGCGGTTATATTTGTAATGAATGTATTGAACTTTGTCACTCAATGCTTGAAGAAAGTAATGATGAAAACCTAGAGGAAA
GTGCGGTCGAAAATAAAGATAAATTGCCAACGCCTCACGAAATTCGCGCCCATCTGGATGATTATGTTATTGGTCAAGAT
TATGCGAAAAAAGTGCTTTCTGTGGCAGTTTATAATCATTATAAACGCTTGCGAACTAACTATGAAAGCAATGATGTAGA
GCTTGGCAAAAGTAATATTTTACTTATAGGCCCTACGGGTAGCGGAAAAACGTTACTTGCGCAAACATTAGCTCGTCGTT
TAAATGTACCCTTTGCGATGGCGGATGCAACCACATTAACGGAAGCTGGTTATGTGGGAGAAGATGTAGAGAATGTATTA
CAGAAACTTTTGCAAAATTGTGAATACGATACTGAAAAAGCAGAGAAAGGCATTATTTATATTGATGAAATTGATAAAAT
TAGCCGTAAATCGGAAGGCGCATCAATTACTCGAGATGTTTCAGGGGAGGGGGTGCAACAGGCTTTATTAAAACTTATTG
AAGGTACAATCGCTTCAATTCCACCTCAAGGCGGTCGTAAACATCCACAACAAGAAATGGTAAAATTGGATACGTCTAAA
ATTCTCTTTATTTGTGGCGGTGCATTTGCAGGATTAGATAAAATTATTGATAAACGCACTCAAACCAGTACGAGTATTGG
TTTTAATGCCAAAGTTGAAAAAGATGAAAAACAACAATCTCTTTCTGAATTATTCCGTCAAGTTGAACCTGATGATTTGA
TGAAATTTGGTTTAATTCCAGAATTTATCGGACGTTTGCCAATGATTGCCCCATTAAGTGAATTAGACGAAGATGCGCTG
ATACAAATTCTCACAAAACCAAAAAACGCATTAATTAAACAATATCAAGCCTTATTTGGATTGGAAAAAGTAGAATTGGA
TTTCACACCAGAAGCATTAAAAGCAATGGCGAAAAAAGCACTTGAAAGAAAAACGGGTGCGCGTGGCTTACGTTCTATCG
TAGAAGCAGTGTTGTTAGATACAATGTATGATCTACCGTCTCTTGAGAATTTACAAAAAGTTATCGTTGATGAATCGACA
ATTGTAGATAATCTTGCGCCCAAATTAGAATATTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-309)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-392)

• ClpX C4-type zinc finger (zf-C4_ClpX) (8-45)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	57.843	99.27	0.574
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.138	97.08	0.535