Detailed information NTG0343072

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FSA28_RS10315
• Genome accession: NZ_CP044495
• Coordinates: 2036513..2037604 (+)
• Length: 363 a.a.
• NCBI ID: WP_002264240.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain UA140
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2031513..2042604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSA28_RS10290 (FSA28_1810)	pgsA	2031921..2032463 (-)	543	WP_002262451.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FSA28_RS10295 (FSA28_1811)	-	2032475..2033452 (-)	978	WP_002270375.1	helix-turn-helix domain-containing protein	-
FSA28_RS10300 (FSA28_1812)	-	2033525..2034817 (-)	1293	WP_002270376.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FSA28_RS10305 (FSA28_1813)	-	2034819..2036066 (-)	1248	WP_002266407.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FSA28_RS10310 (FSA28_1814)	yaaA	2036145..2036510 (+)	366	WP_002270377.1	S4 domain-containing protein YaaA	-
FSA28_RS10315 (FSA28_1815)	recF	2036513..2037604 (+)	1092	WP_002264240.1	DNA replication/repair protein RecF	Machinery gene
FSA28_RS10320 (FSA28_1816)	guaB	2037767..2039248 (-)	1482	WP_002262457.1	IMP dehydrogenase	-
FSA28_RS10325 (FSA28_1817)	trpS	2039405..2040427 (-)	1023	WP_002264241.1	tryptophan--tRNA ligase	-
FSA28_RS10330 (FSA28_1818)	-	2040861..2042480 (+)	1620	WP_002266410.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42042.29 Da
• Isoelectric Point: 9.8334

>NTDB_id=343072 FSA28_RS10315 WP_002264240.1 2036513..2037604(+) (recF) [Streptococcus mutans strain UA140]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNANFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=343072 FSA28_RS10315 WP_002264240.1 2036513..2037604(+) (recF) [Streptococcus mutans strain UA140]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAACTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.722	99.174	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	43.902	100	0.446