Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrR   Type   Regulator
Locus tag   FSA28_RS04615 Genome accession   NZ_CP044495
Coordinates   935510..935944 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain UA140     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 930510..940944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS04585 (FSA28_0690) gdhA 930682..932031 (+) 1350 WP_088741841.1 NADP-specific glutamate dehydrogenase -
  FSA28_RS04590 (FSA28_0691) - 932141..932524 (-) 384 WP_002281981.1 DUF3021 family protein -
  FSA28_RS04595 (FSA28_0692) queF 932633..933121 (-) 489 WP_002265143.1 preQ(1) synthase -
  FSA28_RS04600 (FSA28_0693) queE 933134..933850 (-) 717 WP_002290946.1 7-carboxy-7-deazaguanine synthase QueE -
  FSA28_RS04605 (FSA28_0694) queD 933847..934293 (-) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  FSA28_RS04610 (FSA28_0695) queC 934293..934946 (-) 654 WP_088741840.1 7-cyano-7-deazaguanine synthase QueC -
  FSA28_RS04615 (FSA28_0696) rcrR 935510..935944 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FSA28_RS04620 (FSA28_0697) rcrP 935948..937750 (+) 1803 WP_002266459.1 ABC transporter ATP-binding protein Regulator
  FSA28_RS04625 (FSA28_0698) rcrQ 937740..939494 (+) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  FSA28_RS04630 (FSA28_0699) tpx 939667..940152 (+) 486 WP_002263295.1 thiol peroxidase -
  FSA28_RS04635 (FSA28_0700) - 940318..940752 (+) 435 WP_032526289.1 hypothetical protein -

Sequence


Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=343010 FSA28_RS04615 WP_002263292.1 935510..935944(+) (rcrR) [Streptococcus mutans strain UA140]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=343010 FSA28_RS04615 WP_002263292.1 935510..935944(+) (rcrR) [Streptococcus mutans strain UA140]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains


Predicted by InterProScan.

(31-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1


Multiple sequence alignment