Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrR   Type   Regulator
Locus tag   FSA31_RS04320 Genome accession   NZ_CP044492
Coordinates   885543..885977 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain T8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 880543..890977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS04290 (FSA31_0850) gdhA 880724..882073 (+) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -
  FSA31_RS04295 (FSA31_0851) - 882185..882568 (-) 384 WP_002265142.1 DUF3021 family protein -
  FSA31_RS04300 (FSA31_0852) queF 882677..883165 (-) 489 WP_002265143.1 preQ(1) synthase -
  FSA31_RS04305 (FSA31_0853) queE 883178..883894 (-) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  FSA31_RS04310 (FSA31_0854) queD 883891..884337 (-) 447 WP_002284281.1 6-carboxytetrahydropterin synthase QueD -
  FSA31_RS04315 (FSA31_0855) queC 884337..884990 (-) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  FSA31_RS04320 (FSA31_0856) rcrR 885543..885977 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FSA31_RS04325 (FSA31_0857) rcrP 885981..887783 (+) 1803 WP_002284280.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS04330 (FSA31_0858) rcrQ 887773..889527 (+) 1755 WP_002284279.1 ABC transporter ATP-binding protein Regulator
  FSA31_RS04335 (FSA31_0859) tpx 889724..890209 (+) 486 WP_002275877.1 thiol peroxidase -
  FSA31_RS04340 (FSA31_0860) - 890227..890670 (+) 444 WP_050557105.1 hypothetical protein -

Sequence


Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=342785 FSA31_RS04320 WP_002263292.1 885543..885977(+) (rcrR) [Streptococcus mutans strain T8]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=342785 FSA31_RS04320 WP_002263292.1 885543..885977(+) (rcrR) [Streptococcus mutans strain T8]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains


Predicted by InterProScan.

(31-89)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1


Multiple sequence alignment