Detailed information NTG0342786

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EUZ85_RS28295
• Genome accession: NZ_CP035490
• Coordinates: 6393815..6394879 (-)
• Length: 354 a.a.
• NCBI ID: WP_127973459.1
• Uniprot ID: -
• Organism: Hahella sp. KA22
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6388815..6399879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EUZ85_RS28270 (EUZ85_28270)	aroK	6389283..6389861 (-)	579	WP_127973456.1	shikimate kinase AroK	-
EUZ85_RS28275 (EUZ85_28275)	pilQ	6389952..6392087 (-)	2136	WP_164887385.1	type IV pilus secretin PilQ	Machinery gene
EUZ85_RS28280 (EUZ85_28280)	-	6392087..6392629 (-)	543	WP_241566884.1	pilus assembly protein PilP	-
EUZ85_RS28285 (EUZ85_28285)	-	6392629..6393243 (-)	615	WP_127973457.1	type 4a pilus biogenesis protein PilO	-
EUZ85_RS28290 (EUZ85_28290)	-	6393246..6393815 (-)	570	WP_127973458.1	PilN domain-containing protein	-
EUZ85_RS28295 (EUZ85_28295)	pilM	6393815..6394879 (-)	1065	WP_127973459.1	pilus assembly protein PilM	Machinery gene
EUZ85_RS28300 (EUZ85_28300)	-	6395057..6397468 (+)	2412	WP_127973460.1	penicillin-binding protein 1A	-
EUZ85_RS28305 (EUZ85_28305)	-	6397579..6398850 (-)	1272	WP_127973461.1	malic enzyme-like NAD(P)-binding protein	-
EUZ85_RS28310 (EUZ85_28310)	rpmE	6399092..6399310 (-)	219	WP_127973462.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38264.43 Da
• Isoelectric Point: 4.2460

>NTDB_id=342786 EUZ85_RS28295 WP_127973459.1 6393815..6394879(-) (pilM) [Hahella sp. KA22]
MFGLFGKKKQPVLGLDISSTSVKLIELSQQGSRYRVDSYAVEPLPPNAVVEKNINDAEAVGEVISRVVSKARINTKQAAV
AVAGSAVITKVIQMSSSIREQDLESQIQIEADQYIPYPLDEVALDFEVVGPNEVNAEMMDVLLAACRRENVELREDALEI
GGLTTKVVDVEAYAMERAMGLIEAQLGTGDESQTVAVVDIGATMTTLSVLSDGKTIYTREQLFGGKQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYEQEVLHPFKEAVVQQVARSLQFFFSSTQFNEVDYIILAGGTASIPGIAELVQERVGTTTLVANP
FADMTVSSKVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=342786 EUZ85_RS28295 WP_127973459.1 6393815..6394879(-) (pilM) [Hahella sp. KA22]
GTGTTTGGACTATTTGGAAAGAAAAAACAGCCGGTTTTAGGGCTTGATATCAGTTCTACATCGGTCAAGCTGATTGAACT
CAGTCAGCAGGGCAGTCGATATCGAGTGGATAGTTATGCCGTGGAGCCTTTGCCGCCGAACGCAGTCGTTGAAAAGAATA
TCAATGATGCCGAAGCAGTAGGTGAAGTGATCTCAAGAGTTGTTAGCAAAGCTCGGATCAACACCAAGCAGGCTGCGGTT
GCAGTCGCAGGTTCAGCGGTTATCACCAAAGTCATTCAGATGAGCTCTTCAATTCGAGAGCAGGATCTGGAGTCACAAAT
TCAAATCGAAGCAGACCAATATATCCCTTATCCGTTGGACGAGGTCGCTCTGGACTTTGAAGTAGTGGGTCCAAACGAAG
TCAACGCCGAAATGATGGATGTTTTGTTGGCTGCGTGCAGACGAGAAAATGTTGAGCTGCGTGAAGATGCTCTGGAAATT
GGCGGTCTCACCACGAAAGTGGTGGATGTAGAAGCGTACGCTATGGAACGAGCCATGGGACTTATAGAAGCGCAACTTGG
TACGGGGGATGAGTCTCAAACCGTGGCTGTTGTGGATATCGGCGCCACCATGACTACGTTGAGTGTGTTATCTGACGGCA
AGACTATCTATACGCGTGAACAGCTATTTGGCGGCAAGCAGCTAACGGAAGAAATACAGCGCCGTTATGGTCTGTCTCAA
GAGGAAGCCGGGCTGGCTAAAAAGCAGGGCGGTTTGCCTGACGACTACGAGCAGGAAGTCCTGCATCCTTTCAAAGAAGC
GGTTGTGCAGCAAGTGGCCAGATCGCTGCAGTTCTTTTTCTCGTCCACCCAGTTCAACGAAGTTGATTACATCATTTTAG
CGGGGGGGACAGCCTCAATTCCTGGTATCGCTGAATTGGTTCAGGAGCGGGTCGGAACCACAACGCTGGTGGCGAACCCA
TTTGCAGACATGACAGTGTCGTCAAAGGTTAATGCATCAGCATTAAGTAATGACGCTCCCTCCCTCATGATCGCGTGCGG
ATTGGCAATGAGGAGTTTTGACTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	53.107	100	0.531
pilM	Legionella pneumophila strain ERS1305867	44.633	100	0.446