Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   F7V86_RS02095 Genome accession   NZ_CP044444
Coordinates   393921..394796 (-) Length   291 a.a.
NCBI ID   WP_026092320.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain KC41     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 388921..399796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7V86_RS02060 - 389117..389593 (+) 477 WP_070082285.1 Na+/H+ antiporter subunit E -
  F7V86_RS02065 - 389593..389877 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  F7V86_RS02070 mnhG 389861..390235 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  F7V86_RS02075 - 390275..390658 (-) 384 WP_104842774.1 hotdog fold thioesterase -
  F7V86_RS02080 comA 390680..391324 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  F7V86_RS02085 comP 391405..393711 (-) 2307 WP_065180455.1 sensor histidine kinase Regulator
  F7V86_RS02090 comX 393730..393906 (-) 177 WP_017419424.1 competence pheromone ComX -
  F7V86_RS02095 comQ 393921..394796 (-) 876 WP_026092320.1 polyprenyl synthetase family protein Regulator
  F7V86_RS02100 degQ 394948..395088 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  F7V86_RS02110 - 395553..395894 (+) 342 WP_014418765.1 hypothetical protein -
  F7V86_RS02115 - 395901..397124 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  F7V86_RS02120 - 397254..398720 (-) 1467 WP_106067969.1 nicotinate phosphoribosyltransferase -
  F7V86_RS02125 - 398738..399289 (-) 552 WP_025853916.1 cysteine hydrolase family protein -
  F7V86_RS02130 - 399386..399784 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 291 a.a.        Molecular weight: 33443.22 Da        Isoelectric Point: 4.4649

>NTDB_id=342606 F7V86_RS02095 WP_026092320.1 393921..394796(-) (comQ) [Bacillus amyloliquefaciens strain KC41]
MCLDAETIKEKMKEIVEEKINNPHLKDTLQTFINEKNHFAFGVLAFKHYVAFDGEHYSDITLLASGIELLILAFDIFDDI
EDEDNLDKEWMKIDQSISLNAATSLYSISLQVICELKTNSDFPRLAMKYALNAMQGQHNDLENFPETEDECLQMIKQKSG
SLTAMSAVLGTMLANGEFNEEIENYSYKIGIVKQIENDYYGLFNKNRSDIRKGRKTLILLYLKRRFNAASEKILDLMNAE
ASYHSFLIDNKKSLEDLLFDAGVSQYVSMLIKMYEEEITTSIKDLNIMLEL

Nucleotide


Download         Length: 876 bp        

>NTDB_id=342606 F7V86_RS02095 WP_026092320.1 393921..394796(-) (comQ) [Bacillus amyloliquefaciens strain KC41]
ATGTGTTTAGATGCCGAAACGATTAAAGAGAAGATGAAGGAAATTGTGGAGGAGAAAATAAATAATCCACATTTAAAAGA
CACCCTTCAGACTTTTATAAATGAAAAAAATCATTTTGCTTTTGGTGTTCTTGCATTTAAGCATTATGTGGCTTTCGATG
GTGAGCATTATTCGGATATTACGTTATTAGCTTCAGGAATTGAATTGTTAATTTTAGCTTTTGATATTTTTGACGATATA
GAGGATGAAGATAACTTGGATAAGGAATGGATGAAGATAGATCAATCTATCTCTTTAAATGCAGCCACTTCTCTTTATTC
AATAAGTCTTCAAGTTATTTGTGAGCTTAAAACGAACTCCGATTTTCCCCGGCTCGCTATGAAATATGCTTTAAATGCAA
TGCAAGGTCAGCATAATGACCTCGAAAATTTCCCCGAAACTGAAGACGAATGTCTTCAAATGATTAAACAAAAATCAGGC
TCGCTTACTGCAATGTCAGCTGTATTAGGAACAATGCTTGCAAATGGGGAGTTTAACGAAGAAATTGAGAATTATTCCTA
TAAAATTGGAATTGTTAAACAGATTGAAAATGATTATTATGGTCTTTTTAATAAAAATCGTAGTGATATCAGAAAGGGAA
GAAAAACATTAATTCTGTTGTATCTAAAGCGAAGATTTAATGCTGCTTCAGAAAAAATCTTGGATTTAATGAATGCAGAA
GCAAGTTACCATTCATTCCTCATTGATAATAAAAAAAGCCTTGAAGACCTGCTATTTGATGCAGGAGTTAGCCAGTATGT
TTCAATGTTAATTAAAATGTACGAGGAAGAAATTACGACAAGTATAAAAGATTTAAATATAATGTTAGAACTTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(43-236)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

48.188

94.845

0.457