Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | BACIH_RS19485 | Genome accession | NZ_CP044360 |
| Coordinates | 3898068..3898664 (+) | Length | 198 a.a. |
| NCBI ID | WP_003150697.1 | Uniprot ID | A7Z0E4 |
| Organism | Bacillus amyloliquefaciens strain V167 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3893068..3903664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BACIH_RS19460 (BACIH_3973) | - | 3894415..3894966 (-) | 552 | WP_011996161.1 | cysteine hydrolase family protein | - |
| BACIH_RS19465 (BACIH_3974) | tadA | 3895049..3895531 (+) | 483 | WP_007615141.1 | tRNA adenosine(34) deaminase TadA | - |
| BACIH_RS19475 (BACIH_3976) | dnaX | 3896014..3897705 (+) | 1692 | WP_011996162.1 | DNA polymerase III subunit gamma/tau | - |
| BACIH_RS19480 (BACIH_3977) | - | 3897730..3898053 (+) | 324 | WP_007408754.1 | YbaB/EbfC family nucleoid-associated protein | - |
| BACIH_RS19485 (BACIH_3978) | recR | 3898068..3898664 (+) | 597 | WP_003150697.1 | recombination protein RecR | Machinery gene |
| BACIH_RS19490 (BACIH_3979) | - | 3898683..3898907 (+) | 225 | WP_007408755.1 | YaaL family protein | - |
| BACIH_RS19495 (BACIH_3980) | - | 3898968..3899231 (+) | 264 | WP_003150686.1 | pro-sigmaK processing inhibitor BofA family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21990.53 Da Isoelectric Point: 5.3504
>NTDB_id=342346 BACIH_RS19485 WP_003150697.1 3898068..3898664(+) (recR) [Bacillus amyloliquefaciens strain V167]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=342346 BACIH_RS19485 WP_003150697.1 3898068..3898664(+) (recR) [Bacillus amyloliquefaciens strain V167]
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATAACAGATCAAGACCCTTGTTATATATGTGAGGACACAAGAAGGGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATATAACGGCCAGTACCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTATAA
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATAACAGATCAAGACCCTTGTTATATATGTGAGGACACAAGAAGGGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATATAACGGCCAGTACCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
98.99 |
100 |
0.99 |
| recR | Streptococcus pneumoniae R6 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.551 |
98.99 |
0.52 |