Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BACIH_RS18920 Genome accession   NZ_CP044360
Coordinates   3795912..3796706 (-) Length   264 a.a.
NCBI ID   WP_007407895.1    Uniprot ID   A7ZAN9
Organism   Bacillus amyloliquefaciens strain V167     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3790912..3801706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACIH_RS18900 (BACIH_3872) - 3791254..3792261 (-) 1008 WP_023357221.1 ThiF family adenylyltransferase -
  BACIH_RS18905 (BACIH_3873) - 3792493..3793911 (-) 1419 WP_012118890.1 cell wall metabolism sensor histidine kinase WalK -
  BACIH_RS18910 (BACIH_3874) - 3793908..3794117 (-) 210 WP_012118891.1 winged helix-turn-helix domain-containing protein -
  BACIH_RS18915 (BACIH_3876) htrA 3794629..3795825 (-) 1197 WP_012118892.1 S1C family serine protease Regulator
  BACIH_RS18920 (BACIH_3877) vicX 3795912..3796706 (-) 795 WP_007407895.1 MBL fold metallo-hydrolase Regulator
  BACIH_RS18925 (BACIH_3878) - 3796721..3797560 (-) 840 WP_012118893.1 two-component system regulatory protein YycI -
  BACIH_RS18930 (BACIH_3879) yycH 3797547..3798905 (-) 1359 WP_004393107.1 two-component system activity regulator YycH -
  BACIH_RS18935 (BACIH_3880) walK 3798895..3800730 (-) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -
  BACIH_RS18940 (BACIH_3881) walR 3800737..3801444 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29116.20 Da        Isoelectric Point: 6.0280

>NTDB_id=342341 BACIH_RS18920 WP_007407895.1 3795912..3796706(-) (vicX) [Bacillus amyloliquefaciens strain V167]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMEKIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=342341 BACIH_RS18920 WP_007407895.1 3795912..3796706(-) (vicX) [Bacillus amyloliquefaciens strain V167]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCACTCTTTTCT
GGTGGATGCCGGCCTGAGCGGTAAAGCGATGGACGGGCTGATGGAGAAAATCGGCCGCAAGATAGACGACGTCGACGGCA
TCTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGTCTTCCCGTCTACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGATACCGGACAAAAGTTTCTGTTCCCGATGGAAAG
CGTGAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCACTGATGACGGACACCGGGTATGTGAGCGACAGAATGAAAGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGATGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCCAATGAAGACGCGGCGCTCGCCATGACTGATGTCATCGGTGACGGCACATCGCGCA
TCTATTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCCGGGGAAACGTTTCAGTTATTTGATACCGATCCGAAAATCCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7ZAN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527

Multiple sequence alignment