Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT48_RS07400 Genome accession   NZ_CP035451
Coordinates   1422206..1422931 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain emm230     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1417206..1427931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT48_RS07365 (ETT48_07360) rnpM 1417240..1417536 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT48_RS07370 (ETT48_07365) nusA 1417552..1418709 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  ETT48_RS07375 (ETT48_07370) rimP 1418884..1419420 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT48_RS07385 (ETT48_07380) trmB 1419679..1420314 (-) 636 WP_002994328.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT48_RS07390 (ETT48_07385) ccrZ 1420314..1421105 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT48_RS07395 (ETT48_07390) - 1421169..1422203 (-) 1035 WP_002994331.1 ABC transporter permease -
  ETT48_RS07400 (ETT48_07395) pptA 1422206..1422931 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT48_RS07405 (ETT48_07400) - 1423003..1423422 (+) 420 WP_002983376.1 HIT family protein -
  ETT48_RS07410 (ETT48_07405) - 1423419..1423775 (+) 357 WP_002988657.1 hypothetical protein -
  ETT48_RS07415 (ETT48_07410) - 1423886..1425169 (-) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT48_RS07420 (ETT48_07415) - 1425178..1425702 (-) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  ETT48_RS07425 (ETT48_07420) tsaE 1425677..1426138 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT48_RS07430 (ETT48_07425) - 1426292..1427752 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=342313 ETT48_RS07400 WP_002983379.1 1422206..1422931(-) (pptA) [Streptococcus pyogenes strain emm230]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=342313 ETT48_RS07400 WP_002983379.1 1422206..1422931(-) (pptA) [Streptococcus pyogenes strain emm230]
ATGTTAAACATTAAAAATCTAACAGGAGGATACCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment