Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | F7G16_RS01880 | Genome accession | NZ_CP044352 |
| Coordinates | 449368..450030 (+) | Length | 220 a.a. |
| NCBI ID | WP_004085189.1 | Uniprot ID | Q9PEE9 |
| Organism | Xylella fastidiosa strain ATCC 35879 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 444368..455030
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7G16_RS01865 (F7G16_01950) | - | 444602..445843 (+) | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| F7G16_RS01870 (F7G16_01955) | lolD | 445836..446558 (+) | 723 | WP_004089270.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| F7G16_RS01875 (F7G16_01960) | comA | 446906..449383 (+) | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| F7G16_RS01880 (F7G16_01965) | exbB | 449368..450030 (+) | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| F7G16_RS01885 (F7G16_01970) | - | 450035..450472 (+) | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| F7G16_RS01890 (F7G16_01975) | msbA | 450490..452238 (+) | 1749 | WP_004089264.1 | lipid A export permease/ATP-binding protein MsbA | - |
| F7G16_RS01895 (F7G16_01980) | lpxK | 452235..453254 (+) | 1020 | WP_004089261.1 | tetraacyldisaccharide 4'-kinase | - |
| F7G16_RS01900 (F7G16_01985) | - | 453661..454362 (-) | 702 | WP_228446162.1 | contractile injection system protein, VgrG/Pvc8 family | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 24000.41 Da Isoelectric Point: 8.9727
>NTDB_id=342149 F7G16_RS01880 WP_004085189.1 449368..450030(+) (exbB) [Xylella fastidiosa strain ATCC 35879]
MLELVKAGGWPMLPLLMLGVVALAIVLERLWTLRRNEVLPSGLGREVREWVRRGKLDQNHLESLRRNSPLGALLAAALDV
KGGVREMIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVNQLAGGIGKALVCTAT
GMIIAIPALIFHRYFKGRITGYVIEMEQEAMLLLDAIDGLQIAIQGRNAEVAHPNAVTKD
MLELVKAGGWPMLPLLMLGVVALAIVLERLWTLRRNEVLPSGLGREVREWVRRGKLDQNHLESLRRNSPLGALLAAALDV
KGGVREMIRERIEDTGRHLVHRMERFLNALGTIASAGPLLGLLGTVVGMIQMFLGILDYGVGDVNQLAGGIGKALVCTAT
GMIIAIPALIFHRYFKGRITGYVIEMEQEAMLLLDAIDGLQIAIQGRNAEVAHPNAVTKD
Nucleotide
Download Length: 663 bp
>NTDB_id=342149 F7G16_RS01880 WP_004085189.1 449368..450030(+) (exbB) [Xylella fastidiosa strain ATCC 35879]
ATGCTGGAACTGGTAAAGGCTGGCGGCTGGCCGATGTTGCCGCTGTTGATGTTAGGTGTTGTTGCATTGGCGATTGTGCT
TGAAAGGCTGTGGACTCTGCGTCGTAATGAGGTATTGCCGTCGGGGCTGGGTCGGGAGGTTCGTGAGTGGGTGAGGCGTG
GCAAATTGGACCAAAATCATCTTGAGTCTCTGCGCCGTAATTCTCCGCTTGGTGCGCTATTGGCCGCCGCTTTGGATGTA
AAAGGTGGCGTACGTGAAATGATTCGTGAACGTATTGAGGATACAGGGCGCCATCTGGTGCATCGCATGGAGCGTTTTCT
GAATGCACTCGGTACGATTGCTTCTGCAGGTCCTTTACTTGGTTTGCTAGGTACTGTGGTCGGTATGATTCAAATGTTCC
TGGGGATTCTCGATTATGGCGTGGGCGATGTGAATCAGCTTGCTGGAGGGATTGGCAAGGCATTGGTTTGCACTGCTACA
GGTATGATTATTGCGATTCCCGCTCTGATTTTTCATCGTTATTTCAAGGGGCGAATTACTGGGTACGTGATTGAGATGGA
GCAAGAGGCAATGCTCTTGCTGGATGCGATTGATGGTCTTCAGATTGCTATTCAAGGAAGAAATGCCGAAGTGGCGCACC
CCAATGCTGTCACCAAGGATTGA
ATGCTGGAACTGGTAAAGGCTGGCGGCTGGCCGATGTTGCCGCTGTTGATGTTAGGTGTTGTTGCATTGGCGATTGTGCT
TGAAAGGCTGTGGACTCTGCGTCGTAATGAGGTATTGCCGTCGGGGCTGGGTCGGGAGGTTCGTGAGTGGGTGAGGCGTG
GCAAATTGGACCAAAATCATCTTGAGTCTCTGCGCCGTAATTCTCCGCTTGGTGCGCTATTGGCCGCCGCTTTGGATGTA
AAAGGTGGCGTACGTGAAATGATTCGTGAACGTATTGAGGATACAGGGCGCCATCTGGTGCATCGCATGGAGCGTTTTCT
GAATGCACTCGGTACGATTGCTTCTGCAGGTCCTTTACTTGGTTTGCTAGGTACTGTGGTCGGTATGATTCAAATGTTCC
TGGGGATTCTCGATTATGGCGTGGGCGATGTGAATCAGCTTGCTGGAGGGATTGGCAAGGCATTGGTTTGCACTGCTACA
GGTATGATTATTGCGATTCCCGCTCTGATTTTTCATCGTTATTTCAAGGGGCGAATTACTGGGTACGTGATTGAGATGGA
GCAAGAGGCAATGCTCTTGCTGGATGCGATTGATGGTCTTCAGATTGCTATTCAAGGAAGAAATGCCGAAGTGGCGCACC
CCAATGCTGTCACCAAGGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
48.744 |
90.455 |
0.441 |