Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT52_RS02330 Genome accession   NZ_CP035447
Coordinates   427024..427833 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm97.1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 422024..432833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT52_RS02310 (ETT52_02305) - 422466..423713 (+) 1248 WP_109991791.1 AMP-binding protein -
  ETT52_RS02315 (ETT52_02310) - 423769..424803 (+) 1035 WP_175399891.1 DUF3114 domain-containing protein -
  ETT52_RS02320 (ETT52_02315) vicR 424965..425675 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ETT52_RS02325 (ETT52_02320) vicK 425668..427020 (+) 1353 WP_030126091.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT52_RS02330 (ETT52_02325) vicX 427024..427833 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ETT52_RS02335 (ETT52_02330) rnc 428276..428968 (+) 693 WP_002990670.1 ribonuclease III -
  ETT52_RS02340 (ETT52_02335) smc 428969..432508 (+) 3540 WP_101248313.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=342071 ETT52_RS02330 WP_002985641.1 427024..427833(+) (vicX) [Streptococcus pyogenes strain emm97.1]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=342071 ETT52_RS02330 WP_002985641.1 427024..427833(+) (vicX) [Streptococcus pyogenes strain emm97.1]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment