Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   ETT53_RS06595 Genome accession   NZ_CP035446
Coordinates   1313666..1315018 (-) Length   450 a.a.
NCBI ID   WP_002995609.1    Uniprot ID   A0A4U7GC27
Organism   Streptococcus pyogenes strain emm68.2     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1308666..1320018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT53_RS06585 (ETT53_06585) rnc 1311717..1312409 (-) 693 WP_021733153.1 ribonuclease III -
  ETT53_RS06590 (ETT53_06590) vicX 1312853..1313662 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ETT53_RS06595 (ETT53_06595) vicK 1313666..1315018 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT53_RS06600 (ETT53_06600) vicR 1315011..1315721 (-) 711 WP_002985645.1 response regulator YycF Regulator
  ETT53_RS06605 (ETT53_06605) - 1315883..1316917 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  ETT53_RS06610 (ETT53_06610) - 1316973..1318220 (-) 1248 WP_011284594.1 AMP-binding protein -
  ETT53_RS06615 (ETT53_06615) - 1318177..1319325 (-) 1149 WP_011284593.1 acetyl-CoA C-acyltransferase -
  ETT53_RS06620 (ETT53_06620) - 1319720..1319869 (-) 150 WP_002990686.1 hypothetical protein -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51391.82 Da        Isoelectric Point: 5.4026

>NTDB_id=342032 ETT53_RS06595 WP_002995609.1 1313666..1315018(-) (vicK) [Streptococcus pyogenes strain emm68.2]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=342032 ETT53_RS06595 WP_002995609.1 1313666..1315018(-) (vicK) [Streptococcus pyogenes strain emm68.2]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTATCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCTAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGATTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATCACAGTTCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7GC27

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.947

92

0.671

  micB Streptococcus pneumoniae Cp1015

67.765

94.444

0.64


Multiple sequence alignment