Detailed information    

insolico Bioinformatically predicted

Overview


Name   comD/blpH   Type   Regulator
Locus tag   SALIVB_RS02335 Genome accession   NC_015760
Coordinates   446310..447377 (-) Length   355 a.a.
NCBI ID   WP_231844796.1    Uniprot ID   -
Organism   Streptococcus salivarius CCHSS3     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 441310..452377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVB_RS02310 (SALIVB_0462) - 442337..442504 (+) 168 WP_013990154.1 hypothetical protein -
  SALIVB_RS02315 (SALIVB_0463) - 442498..443178 (+) 681 WP_014633514.1 hypothetical protein -
  SALIVB_RS02320 (SALIVB_0464) - 443497..444156 (+) 660 WP_013990156.1 ABC transporter ATP-binding protein -
  SALIVB_RS02325 (SALIVB_0465) - 444171..444887 (+) 717 WP_041817342.1 hypothetical protein -
  SALIVB_RS02330 (SALIVB_0467) tnpA 445126..445590 (+) 465 WP_002883780.1 IS200/IS605 family transposase -
  SALIVB_RS02335 (SALIVB_0469) comD/blpH 446310..447377 (-) 1068 WP_231844796.1 sensor histidine kinase Regulator
  SALIVB_RS02340 (SALIVB_0470) comE/blpR 447627..448370 (-) 744 WP_002886749.1 response regulator transcription factor Regulator
  SALIVB_RS10965 (SALIVB_0471) - 448870..449223 (+) 354 WP_013990160.1 hypothetical protein -
  SALIVB_RS02355 (SALIVB_0473) tnpA 449895..450368 (+) 474 WP_013990162.1 IS200/IS605 family transposase -
  SALIVB_RS02360 (SALIVB_0474) - 450629..451015 (+) 387 WP_013990163.1 helix-turn-helix domain-containing protein -
  SALIVB_RS02365 (SALIVB_0475) - 451151..451843 (+) 693 WP_013990164.1 DUF6287 domain-containing protein -
  SALIVB_RS02370 (SALIVB_0476) - 451908..452198 (+) 291 WP_002885564.1 hypothetical protein -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 40993.78 Da        Isoelectric Point: 6.9158

>NTDB_id=34180 SALIVB_RS02335 WP_231844796.1 446310..447377(-) (comD/blpH) [Streptococcus salivarius CCHSS3]
MYPIIVDSLLGRMLGFYVFPLLGVYVFNEASLSWYDILIELLVFPFHLLIVKSLKLDFNEIKEGFKRHYFRYLLLLINIS
MLLYMLLVSTFVIYRDKLANADIWRGHINNFYIILFFVMLLYLNAISKEKLEKEIIKQKDTQLYELSSYSHHVESLYEEI
RGFRHDYINILTSLKLGIDNQDIDAVKTVYNDVLKDSAKQFYDSKFDIAKLSNIKNDAIKSILSAKLLEAQNRGISISVE
VEEPISNFRIELLDFITVLSVLCDNAIEAAIETISSKMTVVFINNDDSLVLIVENSIKSEKVEVSRIFVRGHSSKGEGRG
IGLYNVNSILEKYPKSTITTRSANHLFSQTIRFCK

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=34180 SALIVB_RS02335 WP_231844796.1 446310..447377(-) (comD/blpH) [Streptococcus salivarius CCHSS3]
TTGTATCCTATTATTGTAGATAGCTTGCTAGGTAGAATGCTAGGATTCTACGTTTTTCCTTTACTAGGAGTCTACGTTTT
CAATGAAGCCTCACTAAGTTGGTACGATATCTTAATTGAATTACTGGTTTTCCCTTTCCATTTACTCATAGTAAAATCTC
TTAAATTAGATTTTAACGAAATAAAAGAGGGTTTCAAGCGTCACTATTTCAGGTATTTATTATTACTAATTAATATCTCC
ATGCTTCTATATATGTTGTTAGTTTCTACATTTGTTATTTATAGAGATAAATTAGCTAATGCAGACATCTGGAGAGGGCA
TATTAACAACTTTTATATTATTCTGTTTTTTGTAATGCTACTCTACCTCAATGCAATCTCAAAAGAAAAACTAGAGAAGG
AAATAATTAAGCAAAAGGACACCCAATTATATGAACTATCTAGTTACAGCCATCACGTTGAATCCCTTTATGAGGAAATT
AGAGGTTTCCGTCATGACTACATTAATATTTTGACAAGTCTAAAATTAGGGATTGATAATCAAGATATTGACGCTGTTAA
AACTGTTTACAATGATGTCCTTAAAGACAGTGCAAAACAATTCTATGATAGTAAGTTTGATATAGCTAAACTTAGCAATA
TTAAGAATGATGCTATTAAAAGTATTCTTTCCGCTAAATTACTCGAGGCACAGAATAGAGGGATTTCAATTTCTGTCGAG
GTTGAAGAACCTATTAGCAATTTTAGGATAGAATTACTAGATTTTATCACTGTTCTATCTGTCCTTTGTGACAATGCTAT
CGAAGCCGCCATTGAAACTATTAGTTCGAAAATGACTGTCGTTTTCATAAATAATGATGATTCGTTGGTGCTTATCGTCG
AAAATAGTATAAAATCAGAAAAGGTCGAGGTTAGTCGCATTTTTGTTAGAGGTCACTCTAGTAAAGGGGAGGGTAGAGGT
ATTGGCTTATATAATGTAAATAGTATATTGGAAAAATACCCTAAATCTACGATTACCACTCGTAGTGCAAATCACCTCTT
TTCTCAAACTATCAGATTTTGTAAATAA

Domains


Predicted by InterProScan.

(252-351)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

39.143

98.592

0.386


Multiple sequence alignment