Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ETT59_RS01435 Genome accession   NZ_CP035440
Coordinates   263017..264519 (+) Length   500 a.a.
NCBI ID   WP_011017334.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm124     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 258017..269519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS01420 (ETT59_01420) - 258070..259251 (-) 1182 WP_002992220.1 D-alanyl-D-alanine carboxypeptidase family protein -
  ETT59_RS01425 (ETT59_01425) pbp3 259419..260651 (-) 1233 WP_002992223.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  ETT59_RS01430 (ETT59_01430) amiA 260982..262952 (+) 1971 WP_002992224.1 peptide ABC transporter substrate-binding protein Regulator
  ETT59_RS01435 (ETT59_01435) amiC 263017..264519 (+) 1503 WP_011017334.1 ABC transporter permease Regulator
  ETT59_RS01440 (ETT59_01440) amiD 264519..265445 (+) 927 WP_002986004.1 oligopeptide ABC transporter permease OppC Regulator
  ETT59_RS01445 (ETT59_01445) amiE 265454..266524 (+) 1071 WP_010921893.1 ABC transporter ATP-binding protein Regulator
  ETT59_RS01450 (ETT59_01450) amiF 266517..267440 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT59_RS09305 (ETT59_01455) - 267478..267561 (-) 84 Protein_233 IS3 family transposase -
  ETT59_RS01460 (ETT59_01460) - 267588..267782 (-) 195 WP_227868546.1 transposase -

Sequence

Protein


Download         Length: 500 a.a.        Molecular weight: 56149.52 Da        Isoelectric Point: 10.2222

>NTDB_id=341684 ETT59_RS01435 WP_011017334.1 263017..264519(+) (amiC) [Streptococcus pyogenes strain emm124]
MKKYILNRIMRSLVSVVLVTALTYTIVYTLVPTSLIFKQDPNYNKMTTTPDKKVAYENLTFQRMGYVNYFSSKELKDNAS
KVDSSVTTEATSANKAIYEKYIDSLGNGWQLKRFPTSKQFYAIRNIPIYERVWNFFSNLVVIDHPWKIQDKDNPKLARYI
RLEKDKSVGWSLVGSGTKHKYLLYTNGKFPYLHQNFVTLNLGTSYPTYSNIPVLQVISQGQGRTALQDVTFPSGVTKKSS
VDIYSRSYKNPKSLDDITKVNYGKGDSYTKTINNYVDPSMIHNSFVIGFFGVMFSYIVGLPLGLFMARFKNTYFDRFSTA
TMTFMLALPSIAVIYVVRFLGGMVGLPDSFPMLGASDPKSYILPALILGILNIPTTVIWFRRYLVDLQASDWVRFARSKG
LSESEIYRGHLFKNAMVPIVSGVPASIILAIGGATLTETVFAFPGMGKMLIDSIKSANNSMIVGLTFIFTVLSIVSLLLG
DIVMTLVDPRIKLSTKKGGK

Nucleotide


Download         Length: 1503 bp        

>NTDB_id=341684 ETT59_RS01435 WP_011017334.1 263017..264519(+) (amiC) [Streptococcus pyogenes strain emm124]
ATGAAAAAATACATTTTAAACCGTATCATGCGATCGTTAGTGTCGGTAGTTTTGGTAACGGCTTTAACATACACCATCGT
ATATACTCTAGTACCTACCAGCCTTATCTTTAAACAAGACCCTAATTATAATAAAATGACAACAACACCAGATAAAAAAG
TAGCGTATGAAAATCTAACTTTTCAACGTATGGGTTATGTCAATTATTTTTCAAGCAAAGAATTAAAAGATAATGCTTCT
AAAGTAGATAGTAGTGTAACGACAGAAGCAACTAGTGCTAACAAAGCTATCTATGAGAAGTATATTGATTCTCTTGGCAA
TGGCTGGCAGCTAAAACGCTTCCCCACTAGCAAACAGTTTTATGCAATTCGCAATATTCCTATTTACGAACGTGTTTGGA
ACTTTTTCTCAAATCTAGTTGTTATTGATCACCCTTGGAAGATTCAGGATAAAGATAATCCAAAATTAGCTAGGTATATT
CGTCTAGAAAAAGATAAATCAGTTGGCTGGTCACTTGTTGGTTCGGGGACAAAACATAAATATCTCCTCTATACTAACGG
AAAATTTCCTTATCTTCACCAAAACTTTGTTACCCTAAACTTAGGAACATCTTATCCAACATACAGCAATATTCCTGTTC
TTCAGGTTATTTCACAAGGGCAAGGACGAACAGCTCTTCAAGATGTGACCTTCCCATCAGGTGTCACTAAGAAATCGTCA
GTGGATATCTATAGCCGTAGCTACAAAAATCCAAAATCATTGGATGATATCACCAAGGTAAACTATGGTAAGGGAGATTC
CTACACTAAAACCATCAATAATTATGTCGACCCATCAATGATTCACAATTCTTTTGTAATTGGTTTTTTTGGTGTTATGT
TTTCCTATATCGTTGGTTTGCCTCTTGGTTTATTTATGGCTCGGTTTAAAAATACCTATTTTGACCGTTTCTCAACAGCG
ACCATGACCTTCATGCTTGCTTTACCAAGTATTGCTGTTATCTATGTTGTTCGCTTCCTAGGTGGCATGGTTGGTTTACC
AGATAGTTTCCCAATGCTGGGGGCATCTGATCCTAAATCTTATATTTTACCAGCCCTTATTTTAGGAATTTTAAATATTC
CAACTACGGTTATCTGGTTCCGTCGCTATCTTGTTGACCTTCAGGCCAGTGATTGGGTACGTTTTGCGCGTTCAAAAGGA
TTATCAGAATCTGAAATTTACAGAGGGCATCTCTTCAAAAATGCCATGGTCCCAATTGTGTCAGGGGTTCCTGCAAGTAT
TATCCTTGCTATTGGTGGTGCAACCTTAACAGAGACTGTCTTTGCCTTCCCGGGTATGGGTAAAATGTTAATTGATTCTA
TTAAATCTGCTAACAATTCTATGATTGTTGGATTAACCTTTATCTTCACTGTCTTGTCAATTGTTTCACTTTTACTAGGA
GATATTGTCATGACCCTTGTCGATCCACGTATTAAATTGTCAACAAAAAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

59.6

100

0.596
  amiC Streptococcus thermophilus LMD-9

59.2

100

0.592
  amiC Streptococcus thermophilus LMG 18311

59.2

100

0.592

Multiple sequence alignment