Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   F5989_RS09765 Genome accession   NZ_CP044221
Coordinates   1932495..1932974 (+) Length   159 a.a.
NCBI ID   WP_002289336.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCH105     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1927495..1937974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5989_RS09735 (F5989_09915) - 1927889..1928992 (+) 1104 WP_002267744.1 NAD(P)/FAD-dependent oxidoreductase -
  F5989_RS09740 (F5989_09920) rfbA 1929057..1929926 (+) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  F5989_RS09745 (F5989_09925) - 1929928..1930524 (+) 597 WP_002264623.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  F5989_RS09755 (F5989_09935) rfbB 1931156..1932202 (+) 1047 WP_002289338.1 dTDP-glucose 4,6-dehydratase -
  F5989_RS09765 (F5989_09945) mutX 1932495..1932974 (+) 480 WP_002289336.1 NUDIX hydrolase Machinery gene
  F5989_RS09770 (F5989_09950) - 1933044..1934213 (+) 1170 WP_002264617.1 AI-2E family transporter -
  F5989_RS09775 (F5989_09955) - 1934203..1935435 (+) 1233 WP_002289333.1 tetratricopeptide repeat protein -
  F5989_RS09780 (F5989_09960) alsS 1935568..1937247 (+) 1680 WP_156294881.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18942.62 Da        Isoelectric Point: 5.3521

>NTDB_id=341670 F5989_RS09765 WP_002289336.1 1932495..1932974(+) (mutX) [Streptococcus mutans strain NCH105]
MTKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKYVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=341670 F5989_RS09765 WP_002289336.1 1932495..1932974(+) (mutX) [Streptococcus mutans strain NCH105]
ATGACAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAATATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692

Multiple sequence alignment