Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT61_RS10475 Genome accession   NZ_CP035438
Coordinates   54287..54382 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49287..59382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS10260 - 50014..50448 (+) 435 WP_247275531.1 hypothetical protein -
  ETT61_RS10265 - 50576..50935 (+) 360 WP_229380364.1 hypothetical protein -
  ETT61_RS00325 (ETT61_00325) - 50948..51517 (+) 570 WP_032460531.1 hypothetical protein -
  ETT61_RS00330 (ETT61_00330) - 51521..51883 (+) 363 WP_136020475.1 hypothetical protein -
  ETT61_RS00335 (ETT61_00335) purB 51880..53172 (+) 1293 WP_136020474.1 adenylosuccinate lyase -
  ETT61_RS00340 (ETT61_00340) comR 53301..54203 (+) 903 WP_032460886.1 transcriptional regulator Rgg4/ComR Regulator
  ETT61_RS10475 comS 54287..54382 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  ETT61_RS00345 (ETT61_00345) ruvB 54429..55427 (+) 999 WP_136020473.1 Holliday junction branch migration DNA helicase RuvB -
  ETT61_RS00350 (ETT61_00350) - 55565..56002 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  ETT61_RS00355 (ETT61_00355) - 56025..56426 (+) 402 WP_010921781.1 MORN repeat-containing protein -
  ETT61_RS00360 (ETT61_00360) - 56423..58198 (+) 1776 WP_136020472.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=341615 ETT61_RS10475 WP_198462994.1 54287..54382(+) (comS) [Streptococcus pyogenes strain emm22.8]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=341615 ETT61_RS10475 WP_198462994.1 54287..54382(+) (comS) [Streptococcus pyogenes strain emm22.8]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment