Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT69_RS09805 Genome accession   NZ_CP035430
Coordinates   54900..54998 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm55     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49900..59998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT69_RS00325 (ETT69_00325) - 50760..52457 (+) 1698 WP_136019557.1 AIPR family protein -
  ETT69_RS00330 (ETT69_00330) purB 52475..53767 (+) 1293 WP_136019556.1 adenylosuccinate lyase -
  ETT69_RS00335 (ETT69_00335) comR 53898..54809 (+) 912 WP_136019555.1 XRE family transcriptional regulator Regulator
  ETT69_RS09805 comS 54900..54998 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  ETT69_RS00340 (ETT69_00340) ruvB 55029..56027 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  ETT69_RS00345 (ETT69_00345) - 56165..56602 (+) 438 WP_136019554.1 low molecular weight protein-tyrosine-phosphatase -
  ETT69_RS00350 (ETT69_00350) - 56625..57026 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  ETT69_RS00355 (ETT69_00355) - 57023..58798 (+) 1776 WP_136019553.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=341194 ETT69_RS09805 WP_020833188.1 54900..54998(+) (comS) [Streptococcus pyogenes strain emm55]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=341194 ETT69_RS09805 WP_020833188.1 54900..54998(+) (comS) [Streptococcus pyogenes strain emm55]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment