Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT71_RS02645 Genome accession   NZ_CP035428
Coordinates   476840..477649 (+) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 471840..482649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS02625 (ETT71_02620) - 472282..473529 (+) 1248 WP_011284594.1 AMP-binding protein -
  ETT71_RS02630 (ETT71_02625) - 473585..474619 (+) 1035 WP_172451775.1 DUF3114 domain-containing protein -
  ETT71_RS02635 (ETT71_02630) vicR 474781..475491 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ETT71_RS02640 (ETT71_02635) vicK 475484..476836 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT71_RS02645 (ETT71_02640) vicX 476840..477649 (+) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  ETT71_RS02650 (ETT71_02645) rnc 478092..478784 (+) 693 WP_002990670.1 ribonuclease III -
  ETT71_RS02655 (ETT71_02650) smc 478785..482324 (+) 3540 WP_136290288.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=341057 ETT71_RS02645 WP_023612763.1 476840..477649(+) (vicX) [Streptococcus pyogenes strain emmSTG866.1]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=341057 ETT71_RS02645 WP_023612763.1 476840..477649(+) (vicX) [Streptococcus pyogenes strain emmSTG866.1]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment