Detailed information NTG0034100

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SGPB_RS04920
• Genome accession: NC_015600
• Coordinates: 971560..972630 (+)
• Length: 356 a.a.
• NCBI ID: WP_013851816.1
• Uniprot ID: F5X6G8
• Organism: Streptococcus pasteurianus ATCC 43144
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 966560..977630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGPB_RS04895 (SGPB_0926)	-	966820..967518 (+)	699	WP_013851813.1	GntR family transcriptional regulator	-
SGPB_RS04900 (SGPB_0927)	-	967738..968157 (+)	420	WP_013851814.1	Rrf2 family transcriptional regulator	-
SGPB_RS04905 (SGPB_0928)	-	968186..969184 (+)	999	WP_013851815.1	NADP-dependent oxidoreductase	-
SGPB_RS04910 (SGPB_0929)	-	969381..969713 (+)	333	WP_003064715.1	putative DNA-binding protein	-
SGPB_RS04915 (SGPB_0930)	ffh	969784..971349 (+)	1566	WP_003064717.1	signal recognition particle protein	-
SGPB_RS04920 (SGPB_0931)	xerS	971560..972630 (+)	1071	WP_013851816.1	tyrosine recombinase XerS	Machinery gene
SGPB_RS04925 (SGPB_0932)	-	972737..973417 (-)	681	WP_013851817.1	LexA family transcriptional regulator	-
SGPB_RS04930 (SGPB_0933)	-	973501..974448 (-)	948	WP_003064734.1	sensor histidine kinase	-
SGPB_RS04935 (SGPB_0934)	braR	974445..975107 (-)	663	WP_172456417.1	response regulator transcription factor	Regulator
SGPB_RS04940 (SGPB_0935)	-	975195..977174 (-)	1980	WP_013851819.1	FtsX-like permease family protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41333.42 Da
• Isoelectric Point: 9.5095

>NTDB_id=34100 SGPB_RS04920 WP_013851816.1 971560..972630(+) (xerS) [Streptococcus pasteurianus ATCC 43144]
MKREKLLEKIDELKEIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYRRFFEWLLDSGISDVTKIADVELTTLEHLSKKDME
SFILYLRERPSLNTYSTKQGVSQTTINRTLSALSSLFKYLTEEVEDENGEPYFYRNVMKKIATKKKKETLAARAENIKGK
LFLGDETMAFIDYIDTEYQNKLSHRALSSFQKNKERDLALIALLLASGVRLSEAVNLDLKDLNLNMMVIEVTRKGGKRDS
VNVANFAKPYLEAYLQIRAPRYKAEKQDQALFLTEYRGVPNRIDASSVEKLVAKYSQDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALNKL

Nucleotide

• Length: 1071 bp

>NTDB_id=34100 SGPB_RS04920 WP_013851816.1 971560..972630(+) (xerS) [Streptococcus pasteurianus ATCC 43144]
ATGAAACGTGAAAAATTACTTGAAAAAATTGATGAACTTAAAGAAATAATGCCTTGGTACGTCTTGGATTATTACCAATC
AAAACTTTCAGTTCCTTATAGCTTCACAACTTTATATGAATACTTAAAAGAATATCGCCGATTTTTCGAATGGCTTTTGG
ATTCTGGAATTTCAGATGTTACTAAAATTGCTGATGTTGAGTTAACAACCCTGGAACATCTTTCTAAAAAAGACATGGAA
TCATTCATCCTTTATCTGCGTGAACGTCCTTCTTTGAACACTTATTCAACAAAACAAGGTGTCTCACAAACAACGATTAA
TCGGACGTTATCAGCACTTTCAAGCCTGTTTAAATACCTAACAGAAGAGGTCGAAGATGAAAATGGTGAGCCCTACTTCT
ATCGAAATGTCATGAAAAAAATCGCTACTAAGAAGAAAAAAGAAACGCTGGCAGCTCGAGCTGAAAATATAAAAGGCAAA
CTTTTCCTAGGTGACGAGACCATGGCATTTATCGACTATATCGATACAGAGTATCAAAATAAGCTCTCTCACCGCGCCCT
CTCCTCCTTCCAAAAGAATAAGGAGCGTGATTTAGCGCTTATTGCTCTTCTGCTTGCCTCTGGTGTCCGTCTTTCAGAAG
CTGTTAATCTTGATTTGAAAGACTTAAACCTTAATATGATGGTTATCGAAGTCACTCGTAAAGGTGGAAAACGTGATTCT
GTCAATGTTGCTAACTTTGCTAAGCCTTATTTAGAAGCTTATTTACAAATCAGAGCGCCTCGCTATAAGGCGGAAAAACA
AGACCAAGCTCTCTTTTTAACAGAATATCGCGGTGTTCCTAACCGTATTGATGCTTCAAGCGTTGAAAAGTTAGTTGCTA
AATATTCTCAAGATTTCAAAGTTCGTGTAACACCCCATAAACTGCGCCACACACTTGCAACACGTCTTTACGATGCTACT
AAATCACAAGTCCTAGTTAGCCACCAATTAGGACATGCCAGCACACAAGTTACCGACTTATACACCCATATCGTCAACGA
CGAACAAAAAAACGCTTTAAATAAGCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (191-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: F5X6G8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831