Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT73_RS09140 Genome accession   NZ_CP035426
Coordinates   60231..60326 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm57     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 55231..65326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT73_RS00385 (ETT73_00385) - 56104..57444 (+) 1341 WP_023611329.1 hypothetical protein -
  ETT73_RS00390 (ETT73_00390) purB 57813..59105 (+) 1293 WP_136098009.1 adenylosuccinate lyase -
  ETT73_RS00395 (ETT73_00395) comR 59236..60147 (+) 912 WP_023611326.1 transcriptional regulator Rgg4/ComR Regulator
  ETT73_RS09140 comS 60231..60326 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  ETT73_RS00400 (ETT73_00400) ruvB 60373..61371 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  ETT73_RS00405 (ETT73_00405) - 61509..61946 (+) 438 WP_136112731.1 low molecular weight protein-tyrosine-phosphatase -
  ETT73_RS00410 (ETT73_00410) - 61969..62370 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  ETT73_RS00415 (ETT73_00415) - 62367..64142 (+) 1776 WP_136276804.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=340973 ETT73_RS09140 WP_198462994.1 60231..60326(+) (comS) [Streptococcus pyogenes strain emm57]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=340973 ETT73_RS09140 WP_198462994.1 60231..60326(+) (comS) [Streptococcus pyogenes strain emm57]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment