Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ETL60_RS16510 Genome accession   NZ_CP035414
Coordinates   3054834..3057131 (-) Length   765 a.a.
NCBI ID   WP_087614687.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103637     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3049834..3062131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL60_RS16470 (ETL60_16470) mrpB 3050301..3050732 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ETL60_RS16475 (ETL60_16475) mrpC 3050732..3051073 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ETL60_RS16480 (ETL60_16480) mrpD 3051066..3052547 (+) 1482 WP_046160793.1 Na+/H+ antiporter subunit D -
  ETL60_RS16485 (ETL60_16485) mrpE 3052553..3053029 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ETL60_RS16490 (ETL60_16490) mrpF 3053029..3053313 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ETL60_RS16495 (ETL60_16495) mnhG 3053297..3053671 (+) 375 WP_041332992.1 monovalent cation/H(+) antiporter subunit G -
  ETL60_RS16500 (ETL60_16500) yuxO 3053710..3054090 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ETL60_RS16505 (ETL60_16505) comA 3054109..3054753 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ETL60_RS16510 (ETL60_16510) comP 3054834..3057131 (-) 2298 WP_087614687.1 histidine kinase Regulator
  ETL60_RS16515 (ETL60_16515) comX 3057139..3057300 (-) 162 WP_003241045.1 competence pheromone ComX -
  ETL60_RS16520 (ETL60_16520) - 3057315..3058175 (-) 861 WP_046160795.1 polyprenyl synthetase family protein -
  ETL60_RS16525 (ETL60_16525) degQ 3058359..3058499 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ETL60_RS16530 (ETL60_16530) - 3058721..3058846 (+) 126 WP_003228793.1 hypothetical protein -
  ETL60_RS16535 (ETL60_16535) - 3058961..3059329 (+) 369 WP_046381300.1 hypothetical protein -
  ETL60_RS16540 (ETL60_16540) pdeH 3059305..3060534 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88376.80 Da        Isoelectric Point: 8.0515

>NTDB_id=340898 ETL60_RS16510 WP_087614687.1 3054834..3057131(-) (comP) [Bacillus subtilis strain SRCM103637]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKRINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFIIKINESKDLPSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVGIYFCIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDAENVNSFEKVYEKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=340898 ETL60_RS16510 WP_087614687.1 3054834..3057131(-) (comP) [Bacillus subtilis strain SRCM103637]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGAGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGTGGAATAGAAAAAGGGGATATCGTAAAGCGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTGAGCTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACTTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATAATAA
AAATAAATGAATCAAAGGATTTACCATCTGCTTTAGTTTTAATTATATTTCTGTTATCCGCTTCTATTGCTTATATAAGT
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTGGTACCGA
TCATAAATGTAGTGTGTGAAATGTTCCGTTCACACCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCCTTT
TTCTTTTTATTTATCATAGTAGGGATATATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTTCTCACTATTATTAATATCTTTTCTTTCTCACCTTTTTTGTGTTTATATTTGATACCGTATGTCTTTTTAAATG
CGCACTATGTTTCATCCTTTTTAGCAGCTTCATTTATGATGCTAATACCTTTCTCCTTAGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTGATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGCTGAGAACG
TAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAGATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTAATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTC
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.067

100

0.596


Multiple sequence alignment