Detailed information NTG0340856

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ETL60_RS06250
• Genome accession: NZ_CP035414
• Coordinates: 1196793..1197746 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM103637
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1191793..1202746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETL60_RS06225 (ETL60_06225)	argF	1193624..1194583 (+)	960	WP_046160277.1	ornithine carbamoyltransferase	-
ETL60_RS06230 (ETL60_06230)	yjzC	1194669..1194848 (+)	180	WP_003245356.1	YjzC family protein	-
ETL60_RS06235 (ETL60_06235)	yjzD	1194895..1195080 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ETL60_RS06240 (ETL60_06240)	-	1195329..1196063 (+)	735	WP_003245223.1	hypothetical protein	-
ETL60_RS06245 (ETL60_06245)	-	1196145..1196702 (+)	558	WP_046160278.1	hypothetical protein	-
ETL60_RS06250 (ETL60_06250)	med	1196793..1197746 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ETL60_RS06255 (ETL60_06255)	comZ	1197761..1197952 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ETL60_RS06260 (ETL60_06260)	yjzB	1197982..1198218 (-)	237	WP_072173825.1	spore coat protein YjzB	-
ETL60_RS06265 (ETL60_06265)	fabH	1198383..1199321 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ETL60_RS06270 (ETL60_06270)	fabF	1199344..1200585 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ETL60_RS06275 (ETL60_06275)	yjaZ	1200661..1201446 (+)	786	WP_021479557.1	DUF2268 domain-containing protein	-
ETL60_RS06280 (ETL60_06280)	appD	1201638..1202624 (+)	987	WP_046160279.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=340856 ETL60_RS06250 WP_014476425.1 1196793..1197746(+) (med) [Bacillus subtilis strain SRCM103637]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=340856 ETL60_RS06250 WP_014476425.1 1196793..1197746(+) (med) [Bacillus subtilis strain SRCM103637]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGACACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGTGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997