Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   ETL60_RS06255 Genome accession   NZ_CP035414
Coordinates   1197761..1197952 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM103637     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1192761..1202952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL60_RS06225 (ETL60_06225) argF 1193624..1194583 (+) 960 WP_046160277.1 ornithine carbamoyltransferase -
  ETL60_RS06230 (ETL60_06230) yjzC 1194669..1194848 (+) 180 WP_003245356.1 YjzC family protein -
  ETL60_RS06235 (ETL60_06235) yjzD 1194895..1195080 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ETL60_RS06240 (ETL60_06240) - 1195329..1196063 (+) 735 WP_003245223.1 hypothetical protein -
  ETL60_RS06245 (ETL60_06245) - 1196145..1196702 (+) 558 WP_046160278.1 hypothetical protein -
  ETL60_RS06250 (ETL60_06250) med 1196793..1197746 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ETL60_RS06255 (ETL60_06255) comZ 1197761..1197952 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ETL60_RS06260 (ETL60_06260) yjzB 1197982..1198218 (-) 237 WP_072173825.1 spore coat protein YjzB -
  ETL60_RS06265 (ETL60_06265) fabH 1198383..1199321 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ETL60_RS06270 (ETL60_06270) fabF 1199344..1200585 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ETL60_RS06275 (ETL60_06275) yjaZ 1200661..1201446 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  ETL60_RS06280 (ETL60_06280) appD 1201638..1202624 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=340857 ETL60_RS06255 WP_003224559.1 1197761..1197952(+) (comZ) [Bacillus subtilis strain SRCM103637]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=340857 ETL60_RS06255 WP_003224559.1 1197761..1197952(+) (comZ) [Bacillus subtilis strain SRCM103637]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGATGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment