Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ETL58_RS07970 Genome accession   NZ_CP035413
Coordinates   1491976..1492440 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM103629     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486976..1497440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS07950 (ETL58_07950) kinA 1487443..1489263 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  ETL58_RS07955 (ETL58_07955) dapX 1489273..1490454 (-) 1182 WP_101172463.1 aminotransferase A -
  ETL58_RS07960 (ETL58_07960) - 1490656..1490817 (-) 162 WP_003245246.1 hypothetical protein -
  ETL58_RS07965 (ETL58_07965) cheV 1491021..1491932 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  ETL58_RS07970 (ETL58_07970) kre 1491976..1492440 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ETL58_RS07975 (ETL58_07975) ykuC 1492566..1493858 (-) 1293 WP_029727007.1 MFS transporter -
  ETL58_RS07980 (ETL58_07980) ltdD 1493934..1494428 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  ETL58_RS07985 (ETL58_07985) ppeE 1494480..1495343 (-) 864 WP_029727008.1 metallophosphoesterase -
  ETL58_RS07990 (ETL58_07990) fadH 1495486..1496250 (+) 765 WP_029317730.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=340786 ETL58_RS07970 WP_003232406.1 1491976..1492440(-) (kre) [Bacillus subtilis strain SRCM103629]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=340786 ETL58_RS07970 WP_003232406.1 1491976..1492440(-) (kre) [Bacillus subtilis strain SRCM103629]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment