Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | F5K02_RS08075 | Genome accession | NZ_CP044132 |
| Coordinates | 1597353..1598375 (+) | Length | 340 a.a. |
| NCBI ID | WP_007409697.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain ZKY01 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1592353..1603375
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F5K02_RS08035 (F5K02_08100) | - | 1592712..1592951 (+) | 240 | WP_003154475.1 | YlbE-like family protein | - |
| F5K02_RS08040 (F5K02_08105) | ylbF | 1593022..1593471 (+) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| F5K02_RS08045 (F5K02_08110) | - | 1593530..1593802 (+) | 273 | WP_003154470.1 | YlbG family protein | - |
| F5K02_RS08050 (F5K02_08115) | - | 1593893..1594102 (+) | 210 | WP_007409692.1 | hypothetical protein | - |
| F5K02_RS08055 (F5K02_08120) | rsmD | 1594102..1594656 (+) | 555 | WP_007409693.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| F5K02_RS08060 (F5K02_08125) | coaD | 1594661..1595143 (+) | 483 | WP_007409694.1 | pantetheine-phosphate adenylyltransferase | - |
| F5K02_RS08065 (F5K02_08130) | ylbJ | 1595162..1596388 (-) | 1227 | WP_094031688.1 | sporulation integral membrane protein YlbJ | - |
| F5K02_RS08070 (F5K02_08135) | - | 1596568..1597347 (+) | 780 | WP_014304961.1 | patatin family protein | - |
| F5K02_RS08075 (F5K02_08140) | sepM | 1597353..1598375 (+) | 1023 | WP_007409697.1 | SepM family pheromone-processing serine protease | Regulator |
| F5K02_RS08080 (F5K02_08145) | - | 1598475..1599625 (+) | 1151 | WP_113766850.1 | IS3 family transposase | - |
| F5K02_RS08085 (F5K02_08150) | - | 1599684..1600931 (-) | 1248 | WP_094032418.1 | nucleotidyltransferase | - |
| F5K02_RS08090 (F5K02_08155) | - | 1601140..1601658 (+) | 519 | WP_007409699.1 | DUF177 domain-containing protein | - |
| F5K02_RS08095 (F5K02_08160) | rpmF | 1601680..1601859 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| F5K02_RS08100 (F5K02_08165) | gerR | 1602017..1602592 (+) | 576 | WP_015239811.1 | sporulation-specific transcriptional regulator GerR | - |
| F5K02_RS08105 (F5K02_08170) | - | 1602632..1603114 (-) | 483 | WP_007409700.1 | N-acetyltransferase | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37448.99 Da Isoelectric Point: 7.3837
>NTDB_id=340786 F5K02_RS08075 WP_007409697.1 1597353..1598375(+) (sepM) [Bacillus amyloliquefaciens strain ZKY01]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYEEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYEEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=340786 F5K02_RS08075 WP_007409697.1 1597353..1598375(+) (sepM) [Bacillus amyloliquefaciens strain ZKY01]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGAAGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGTTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCTCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGAAGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGTTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCTCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.953 |
100 |
0.394 |