Detailed information NTG0340780

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: F5K02_RS07345
• Genome accession: NZ_CP044132
• Coordinates: 1417102..1419198 (-)
• Length: 698 a.a.
• NCBI ID: WP_241458170.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ZKY01
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1412102..1424198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5K02_RS07325 (F5K02_07365)	-	1413591..1414037 (+)	447	WP_007408463.1	MarR family transcriptional regulator	-
F5K02_RS07330 (F5K02_07370)	motB	1414073..1414858 (-)	786	WP_003154685.1	flagellar motor protein MotB	-
F5K02_RS07335 (F5K02_07375)	motA	1414830..1415645 (-)	816	WP_007408461.1	flagellar motor stator protein MotA	-
F5K02_RS07340 (F5K02_07380)	-	1415887..1417036 (+)	1150	Protein_1387	IS3 family transposase	-
F5K02_RS07345 (F5K02_07385)	clpE	1417102..1419198 (-)	2097	WP_241458170.1	ATP-dependent protease ATP-binding subunit ClpE	Regulator
F5K02_RS07350 (F5K02_07395)	-	1419601..1420638 (+)	1038	WP_012117417.1	membrane protein	-
F5K02_RS07355 (F5K02_07400)	-	1420736..1421857 (+)	1122	WP_241458172.1	hypothetical protein	-
F5K02_RS07360 (F5K02_07405)	queC	1422108..1422767 (+)	660	WP_003154679.1	7-cyano-7-deazaguanine synthase QueC	-
F5K02_RS07365 (F5K02_07410)	queD	1422768..1423208 (+)	441	WP_007611020.1	6-carboxytetrahydropterin synthase QueD	-
F5K02_RS07370 (F5K02_07415)	queE	1423201..1423932 (+)	732	WP_015239741.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

• Length: 698 a.a.
• Molecular weight: 77688.71 Da
• Isoelectric Point: 5.5096

>NTDB_id=340780 F5K02_RS07345 WP_241458170.1 1417102..1419198(-) (clpE) [Bacillus amyloliquefaciens strain ZKY01]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGSEKGLLDELAQNV
TNGAKAGLIDPVIGRDHEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALHEENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVLEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELGDTLKERGISLSVTDE
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDNNDIKAFHVVMEEDGIKVRAQ

Nucleotide

• Length: 2097 bp

>NTDB_id=340780 F5K02_RS07345 WP_241458170.1 1417102..1419198(-) (clpE) [Bacillus amyloliquefaciens strain ZKY01]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCTCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATCATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAACCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAACGTCATCTTGTT
CATTGACGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAGCTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCATGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCGTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGGGCGG
AGCATATTCAAGCCATTATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTTAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACTCTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTCAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCCTGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGGAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTAACGGACGAA
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCAGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATAACAACGATATAAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (115-246)

• AAA lid domain (AAA_lid_9) (252-351)

• AAA domain (Cdc48 subfamily) (AAA_2) (436-602)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	56.871	100	0.599
clpE	Streptococcus pneumoniae TIGR4	56.54	100	0.595
clpE	Streptococcus pneumoniae Rx1	56.54	100	0.595
clpE	Streptococcus pneumoniae D39	56.54	100	0.595
clpE	Streptococcus pneumoniae R6	56.54	100	0.595
clpC	Lactococcus lactis subsp. cremoris KW2	56.403	100	0.593
clpC	Bacillus subtilis subsp. subtilis str. 168	54.232	91.404	0.496
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.154	91.261	0.421
clpC	Streptococcus thermophilus LMD-9	44.154	93.123	0.411
clpC	Streptococcus pneumoniae Rx1	45.88	88.682	0.407
clpC	Streptococcus pneumoniae D39	45.88	88.682	0.407
clpC	Streptococcus pneumoniae TIGR4	45.88	88.682	0.407
clpC	Streptococcus thermophilus LMG 18311	43.538	93.123	0.405
clpC	Streptococcus mutans UA159	44.246	88.395	0.391
clpA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	41.026	89.398	0.367