Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ETL58_RS02055 Genome accession   NZ_CP035413
Coordinates   373715..374113 (-) Length   132 a.a.
NCBI ID   WP_003246342.1    Uniprot ID   A0AAE2SGH7
Organism   Bacillus subtilis strain SRCM103629     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 368715..379113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS02025 (ETL58_02025) yckA 369412..370092 (-) 681 WP_024572176.1 amino acid ABC transporter permease -
  ETL58_RS02030 (ETL58_02030) yckB 370102..370965 (-) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  ETL58_RS02035 (ETL58_02035) - 371127..371323 (+) 197 Protein_353 hypothetical protein -
  ETL58_RS02040 (ETL58_02040) - 371363..371677 (+) 315 Protein_354 RDD family protein -
  ETL58_RS02045 (ETL58_02045) yckD 371759..372091 (+) 333 WP_003246247.1 YckD family protein -
  ETL58_RS02050 (ETL58_02050) bglC 372245..373678 (+) 1434 WP_003246242.1 6-phospho-beta-glucosidase -
  ETL58_RS02055 (ETL58_02055) nin/comJ 373715..374113 (-) 399 WP_003246342.1 DNA-entry nuclease inhibitor Regulator
  ETL58_RS02060 (ETL58_02060) nucA/comI 374140..374589 (-) 450 WP_003246436.1 DNA-entry nuclease Machinery gene
  ETL58_RS02065 (ETL58_02065) tlpC 374757..376478 (-) 1722 WP_003246498.1 methyl-accepting chemotaxis protein TlpC -
  ETL58_RS02070 (ETL58_02070) hxlB 376589..377146 (-) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  ETL58_RS02075 (ETL58_02075) hxlA 377152..377784 (-) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  ETL58_RS02080 (ETL58_02080) hxlR 378017..378379 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14996.95 Da        Isoelectric Point: 4.8991

>NTDB_id=340763 ETL58_RS02055 WP_003246342.1 373715..374113(-) (nin/comJ) [Bacillus subtilis strain SRCM103629]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=340763 ETL58_RS02055 WP_003246342.1 373715..374113(-) (nin/comJ) [Bacillus subtilis strain SRCM103629]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment