Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   F5K02_RS00590 Genome accession   NZ_CP044132
Coordinates   108018..109100 (+) Length   360 a.a.
NCBI ID   WP_007410390.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZKY01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 103018..114100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5K02_RS00575 (F5K02_00575) - 103022..104113 (+) 1092 WP_003156398.1 protein arginine kinase -
  F5K02_RS00580 (F5K02_00580) clpC 104110..106542 (+) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  F5K02_RS00585 (F5K02_00585) radA/sms 106635..108014 (+) 1380 WP_014304212.1 DNA repair protein RadA Machinery gene
  F5K02_RS00590 (F5K02_00590) disA 108018..109100 (+) 1083 WP_007410390.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  F5K02_RS00595 (F5K02_00595) - 109214..110314 (+) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  F5K02_RS00600 (F5K02_00600) ispD 110327..111025 (+) 699 WP_063096294.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  F5K02_RS00605 (F5K02_00605) ispF 111018..111494 (+) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  F5K02_RS00610 (F5K02_00610) gltX 111586..113037 (+) 1452 WP_007410392.1 glutamate--tRNA ligase -
  F5K02_RS00615 (F5K02_00615) cysE 113348..114001 (+) 654 WP_007410393.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.26 Da        Isoelectric Point: 5.7630

>NTDB_id=340732 F5K02_RS00590 WP_007410390.1 108018..109100(+) (disA) [Bacillus amyloliquefaciens strain ZKY01]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAKKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=340732 F5K02_RS00590 WP_007410390.1 108018..109100(+) (disA) [Bacillus amyloliquefaciens strain ZKY01]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAAGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCAGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCATCGATATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATTAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTCTGTTTAAGCTGCTTGGATATCCGGCTTCTACCAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAAGGTATCGGCGAAGTGCGCGCCAAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.167

100

0.942


Multiple sequence alignment