Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ETK69_RS02210 Genome accession   NZ_CP035410
Coordinates   396400..396798 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103616     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 391400..401798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK69_RS02185 (ETK69_02185) - 391573..392775 (+) 1203 WP_014416870.1 GTP-binding protein -
  ETK69_RS02190 (ETK69_02190) - 392840..393976 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  ETK69_RS02195 (ETK69_02195) - 393990..394424 (+) 435 WP_061861834.1 RDD family protein -
  ETK69_RS02200 (ETK69_02200) - 394496..394819 (+) 324 WP_007409357.1 YckD family protein -
  ETK69_RS02205 (ETK69_02205) - 394923..396359 (+) 1437 WP_061861835.1 family 1 glycosylhydrolase -
  ETK69_RS02210 (ETK69_02210) nin/comJ 396400..396798 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  ETK69_RS02215 (ETK69_02215) nucA/comI 396819..397256 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ETK69_RS02220 (ETK69_02220) hxlB 397587..398144 (-) 558 WP_065180943.1 6-phospho-3-hexuloisomerase -
  ETK69_RS02225 (ETK69_02225) hxlA 398141..398776 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  ETK69_RS02230 (ETK69_02230) - 399008..399370 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=340606 ETK69_RS02210 WP_007609299.1 396400..396798(-) (nin/comJ) [Bacillus velezensis strain SRCM103616]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=340606 ETK69_RS02210 WP_007609299.1 396400..396798(-) (nin/comJ) [Bacillus velezensis strain SRCM103616]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment