Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ETK49_RS17385 Genome accession   NZ_CP035405
Coordinates   3302388..3304694 (-) Length   768 a.a.
NCBI ID   WP_119498753.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103608     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3297388..3309694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK49_RS17345 (ETK49_17345) - 3297850..3298281 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  ETK49_RS17350 (ETK49_17350) - 3298281..3298622 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  ETK49_RS17355 (ETK49_17355) - 3298615..3300093 (+) 1479 WP_025804921.1 Na+/H+ antiporter subunit D -
  ETK49_RS17360 (ETK49_17360) - 3300099..3300575 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  ETK49_RS17365 (ETK49_17365) - 3300575..3300859 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  ETK49_RS17370 (ETK49_17370) mnhG 3300843..3301217 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  ETK49_RS17375 (ETK49_17375) - 3301257..3301646 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  ETK49_RS17380 (ETK49_17380) comA 3301663..3302301 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  ETK49_RS17385 (ETK49_17385) comP 3302388..3304694 (-) 2307 WP_119498753.1 ATP-binding protein Regulator
  ETK49_RS17390 (ETK49_17390) comX 3304717..3304881 (-) 165 WP_003184853.1 competence pheromone ComX -
  ETK49_RS17395 (ETK49_17395) - 3304890..3305771 (-) 882 WP_003184856.1 polyprenyl synthetase family protein -
  ETK49_RS17400 (ETK49_17400) degQ 3305960..3306100 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  ETK49_RS17410 (ETK49_17410) - 3306586..3306933 (+) 348 WP_009329512.1 hypothetical protein -
  ETK49_RS17415 (ETK49_17415) - 3306976..3308196 (-) 1221 WP_003184864.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88374.68 Da        Isoelectric Point: 6.8179

>NTDB_id=340504 ETK49_RS17385 WP_119498753.1 3302388..3304694(-) (comP) [Bacillus licheniformis strain SRCM103608]
MKFSLKLVSVTLVVITCIYTFFVIYLCYNNMFVGAYLAYNSKNQLVVDYVEEDSLADYTGLKAGDIILEVNNEKPSKKEP
KNKILADVRSLSIERNGKIITTDTRDTIISYDVLFTVLIPVVFYLLCMFCVFLILKSNKTNKQMSSFLLISFLIIISLAY
VSVGGVSRGDKFSRYLNLLTFLSVPASYYHFILQYFKEIGKKFFSNKILLLYALPFLNIVLEIFYDLTDFLEEGRPYVNL
FSFFIGIVLVFGVIIYGIIKYKHSEEIYFLKMLMLGNFLGVFPFVVFFVLPILIIGDYIYSAAVVAPCLLIIPFSLVYQF
ISNKTYDVEFLVGRLKYYGLLAIIPTIMLISAFKLIKYQTGDYYDLRFTIYIYLVMLGVFYLKEILDYRFRLKRFSEKYN
YQDSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEEDAEEYPWIPYEQEVTKVITDIGKIVE
VDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNKLMF
AIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQLLYDLG
LVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHYEDDGI
GVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=340504 ETK49_RS17385 WP_119498753.1 3302388..3304694(-) (comP) [Bacillus licheniformis strain SRCM103608]
ATGAAATTTTCATTGAAGTTAGTGTCAGTAACTCTTGTGGTGATTACCTGTATATATACTTTCTTTGTTATATATCTATG
TTATAACAACATGTTTGTAGGTGCATACTTAGCCTACAATTCGAAAAACCAGCTAGTTGTGGATTATGTTGAGGAAGATT
CCTTAGCCGATTATACGGGTTTAAAAGCTGGAGATATCATTCTTGAGGTTAATAATGAGAAGCCGTCTAAGAAGGAACCA
AAAAATAAAATTCTAGCAGATGTCCGTTCACTTTCTATTGAGAGAAATGGAAAAATCATTACAACTGATACAAGGGATAC
TATTATTAGTTATGATGTTTTATTTACTGTTTTAATCCCGGTTGTATTTTATTTATTATGCATGTTTTGTGTGTTTTTGA
TTTTAAAATCTAACAAGACGAATAAACAAATGTCTTCATTTTTGCTAATTTCATTTTTAATCATAATTTCACTGGCTTAT
GTAAGTGTCGGTGGAGTTTCAAGAGGTGATAAATTTAGCCGATATCTGAATTTGTTAACCTTTCTATCAGTACCTGCTAG
TTATTATCACTTTATACTTCAATATTTCAAAGAAATTGGCAAAAAATTCTTTAGCAATAAAATATTGTTGCTCTATGCTT
TACCTTTCTTGAATATCGTTTTAGAAATTTTTTATGACCTTACTGATTTTCTTGAGGAAGGTAGGCCATATGTCAATTTG
TTTTCGTTCTTTATAGGAATTGTTTTAGTTTTCGGAGTTATTATTTACGGTATAATTAAATATAAGCATTCAGAGGAAAT
TTATTTCTTGAAAATGCTTATGTTAGGAAATTTCCTTGGTGTTTTTCCTTTTGTAGTATTCTTTGTTCTTCCAATTTTAA
TTATTGGGGATTATATTTATTCCGCCGCAGTAGTAGCTCCATGTCTATTGATCATTCCGTTTTCTTTAGTTTATCAATTC
ATATCTAATAAAACTTATGATGTGGAGTTTTTGGTTGGAAGATTAAAATACTATGGCCTATTGGCGATTATTCCAACAAT
TATGTTGATATCTGCTTTCAAGCTAATAAAGTATCAAACTGGGGACTACTATGATCTAAGATTCACAATCTATATCTACC
TGGTCATGCTCGGTGTTTTTTACCTTAAAGAAATCCTTGATTACCGCTTCCGTCTGAAACGTTTTTCAGAGAAGTATAAC
TACCAAGACAGTATATTTAAGTTCACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATTGAAACA
AACAATTCTCGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTCAAAAGCGACGGAACAATATCTTTGCTCGAAG
AAGATGCCGAAGAATATCCGTGGATCCCCTACGAACAAGAAGTAACCAAGGTCATCACCGATATCGGCAAAATCGTCGAA
GTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTTGTCGGTTTTAAATAC
GCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACGTGCTGA
AAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTGATGTTT
GCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATATGATTTCCTTGAAGCA
TCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAAGGCTCATCAATATGA
ATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTGTTGTACGATCTCGGA
CTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATACGGAAAG
GTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGGTTAAAC
ATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGACGGCATT
GGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGCGTCCGCGCACTGAA
CGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.387

100

0.529


Multiple sequence alignment