Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGB   Type   Machinery gene
Locus tag   ETA57_RS14060 Genome accession   NZ_CP035404
Coordinates   2680779..2681813 (-) Length   344 a.a.
NCBI ID   WP_026699158.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103583     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2675779..2686813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA57_RS14010 (ETA57_14010) - 2675848..2676642 (-) 795 WP_003183447.1 TasA family protein -
  ETA57_RS14015 (ETA57_14015) - 2676716..2677300 (-) 585 WP_003183449.1 signal peptidase I -
  ETA57_RS14020 (ETA57_14020) tapA 2677297..2678025 (-) 729 WP_003183451.1 amyloid fiber anchoring/assembly protein TapA -
  ETA57_RS14025 (ETA57_14025) - 2678335..2678622 (+) 288 WP_223307118.1 YqzG/YhdC family protein -
  ETA57_RS14030 (ETA57_14030) - 2678652..2678834 (-) 183 WP_003183456.1 YqzE family protein -
  ETA57_RS14035 (ETA57_14035) comGG 2678923..2679288 (-) 366 WP_003183459.1 competence type IV pilus minor pilin ComGG -
  ETA57_RS14040 (ETA57_14040) comGF 2679301..2679789 (-) 489 WP_011201694.1 competence type IV pilus minor pilin ComGF -
  ETA57_RS14045 (ETA57_14045) comGE 2679698..2680045 (-) 348 WP_026699160.1 competence type IV pilus minor pilin ComGE -
  ETA57_RS14050 (ETA57_14050) comGD 2680029..2680466 (-) 438 WP_026699159.1 competence type IV pilus minor pilin ComGD -
  ETA57_RS14055 (ETA57_14055) comGC 2680472..2680765 (-) 294 WP_003183466.1 competence type IV pilus major pilin ComGC Machinery gene
  ETA57_RS14060 (ETA57_14060) comGB 2680779..2681813 (-) 1035 WP_026699158.1 competence type IV pilus assembly protein ComGB Machinery gene
  ETA57_RS14065 (ETA57_14065) comGA 2681803..2682867 (-) 1065 WP_069500612.1 competence type IV pilus ATPase ComGA Machinery gene
  ETA57_RS14070 (ETA57_14070) - 2683024..2683863 (-) 840 WP_003183480.1 STAS domain-containing protein -
  ETA57_RS14080 (ETA57_14080) - 2684105..2684482 (-) 378 WP_003183482.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  ETA57_RS14085 (ETA57_14085) - 2684691..2684936 (+) 246 WP_003183483.1 DUF2626 domain-containing protein -
  ETA57_RS14090 (ETA57_14090) - 2684974..2685612 (-) 639 WP_003183485.1 MBL fold metallo-hydrolase -
  ETA57_RS14095 (ETA57_14095) - 2685768..2685941 (+) 174 WP_003183486.1 DUF2759 domain-containing protein -
  ETA57_RS14100 (ETA57_14100) - 2686002..2686316 (-) 315 WP_003183487.1 MTH1187 family thiamine-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 39750.01 Da        Isoelectric Point: 9.3543

>NTDB_id=340417 ETA57_RS14060 WP_026699158.1 2680779..2681813(-) (comGB) [Bacillus licheniformis strain SRCM103583]
MKIKMKWPVREQADLLKKLGDMMQSGYMILDALSMLKLQLNERRRADLTFAMEKLTEGCPVFQVLEMISFHKDAVTIVYF
AEQHGNLPFAFRQSGELLHRKIAQSEKLKKAARYPLFLVLTVCVIISIMKSAIVPQFSAIYESMNVETSFATTLIFYVFD
HFYLFFAGLPLVAAALSLYYLCSFRHKPPEDKMAFLITIPLLGQTFKLFNSYFLSLQLSNLLQAGLSVYDSLKAFESQPF
LRFHKNEAKRLIERLKQGESLEQMLAGHPFYENDLAKAVAHGQLNGHLYRELYSYSQFLIERLERKAEKWTGLIQPLIYG
LTAAIILILYLSMLLPMYQMMNQL

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=340417 ETA57_RS14060 WP_026699158.1 2680779..2681813(-) (comGB) [Bacillus licheniformis strain SRCM103583]
ATGAAGATTAAAATGAAGTGGCCTGTCCGGGAACAGGCGGACCTTCTGAAAAAACTAGGAGACATGATGCAGAGTGGCTA
TATGATTTTGGATGCTTTAAGTATGCTGAAATTGCAATTGAATGAAAGACGAAGAGCGGATCTGACATTTGCGATGGAGA
AGCTGACAGAAGGGTGTCCTGTGTTTCAAGTTCTTGAAATGATTTCCTTTCATAAGGATGCTGTCACCATTGTTTACTTT
GCCGAACAGCACGGGAATTTGCCATTTGCCTTTAGGCAGAGCGGAGAGCTGCTTCACCGCAAGATCGCTCAAAGCGAAAA
ATTAAAGAAAGCCGCCAGATACCCCTTGTTTTTAGTTTTAACGGTCTGCGTCATCATCTCTATTATGAAATCAGCAATAG
TTCCGCAATTTTCCGCCATCTATGAATCGATGAACGTTGAAACGTCTTTTGCAACGACTCTCATCTTTTATGTTTTCGAT
CACTTTTATCTTTTTTTCGCGGGACTGCCGCTGGTTGCCGCAGCTCTATCCCTCTATTATCTGTGTTCATTCCGCCATAA
ACCTCCAGAAGACAAAATGGCCTTTCTCATTACAATTCCCTTGCTGGGCCAAACCTTCAAACTATTCAACAGCTATTTTT
TATCGCTCCAGCTGAGCAATCTTTTGCAAGCGGGTCTGTCTGTATATGACAGTTTAAAAGCATTTGAAAGCCAGCCGTTT
TTACGATTTCATAAAAATGAAGCGAAGCGCTTGATCGAGCGGCTGAAACAGGGGGAGAGTCTGGAGCAGATGCTGGCCGG
ACATCCGTTTTATGAAAATGATTTAGCAAAGGCTGTTGCACACGGCCAACTAAATGGGCACTTATACAGAGAGCTGTATT
CATATAGTCAGTTTTTGATTGAGCGGCTTGAAAGAAAGGCCGAAAAATGGACAGGCCTGATCCAGCCATTGATTTACGGG
CTAACCGCGGCGATCATATTAATTCTTTATTTGTCCATGCTTTTGCCAATGTATCAAATGATGAACCAGCTATAA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(216-336)

Type II secretion system (T2SS), protein F (T2SSF)

(16-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGB Bacillus subtilis subsp. subtilis str. 168

56.037

93.895

0.526

Multiple sequence alignment