Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ETA57_RS14005 | Genome accession | NZ_CP035404 |
| Coordinates | 2675408..2675743 (+) | Length | 111 a.a. |
| NCBI ID | WP_006637528.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain SRCM103583 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2670408..2680743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETA57_RS13985 (ETA57_13985) | gcvT | 2670840..2671934 (-) | 1095 | WP_003183436.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ETA57_RS13990 (ETA57_13990) | - | 2672527..2674206 (+) | 1680 | WP_003183439.1 | SNF2-related protein | - |
| ETA57_RS13995 (ETA57_13995) | - | 2674213..2675007 (+) | 795 | WP_003183441.1 | YqhG family protein | - |
| ETA57_RS14000 (ETA57_14000) | sinI | 2675198..2675374 (+) | 177 | WP_003183444.1 | anti-repressor SinI family protein | Regulator |
| ETA57_RS14005 (ETA57_14005) | sinR | 2675408..2675743 (+) | 336 | WP_006637528.1 | helix-turn-helix domain-containing protein | Regulator |
| ETA57_RS14010 (ETA57_14010) | - | 2675848..2676642 (-) | 795 | WP_003183447.1 | TasA family protein | - |
| ETA57_RS14015 (ETA57_14015) | - | 2676716..2677300 (-) | 585 | WP_003183449.1 | signal peptidase I | - |
| ETA57_RS14020 (ETA57_14020) | tapA | 2677297..2678025 (-) | 729 | WP_003183451.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETA57_RS14025 (ETA57_14025) | - | 2678335..2678622 (+) | 288 | WP_223307118.1 | YqzG/YhdC family protein | - |
| ETA57_RS14030 (ETA57_14030) | - | 2678652..2678834 (-) | 183 | WP_003183456.1 | YqzE family protein | - |
| ETA57_RS14035 (ETA57_14035) | comGG | 2678923..2679288 (-) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| ETA57_RS14040 (ETA57_14040) | comGF | 2679301..2679789 (-) | 489 | WP_011201694.1 | competence type IV pilus minor pilin ComGF | - |
| ETA57_RS14045 (ETA57_14045) | comGE | 2679698..2680045 (-) | 348 | WP_026699160.1 | competence type IV pilus minor pilin ComGE | - |
| ETA57_RS14050 (ETA57_14050) | comGD | 2680029..2680466 (-) | 438 | WP_026699159.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12963.59 Da Isoelectric Point: 5.9495
>NTDB_id=340415 ETA57_RS14005 WP_006637528.1 2675408..2675743(+) (sinR) [Bacillus licheniformis strain SRCM103583]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKRQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKKRQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=340415 ETA57_RS14005 WP_006637528.1 2675408..2675743(+) (sinR) [Bacillus licheniformis strain SRCM103583]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAAAAG
ACAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAAAAG
ACAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
93.694 |
100 |
0.937 |