Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FOB77_RS08255 Genome accession   NZ_CP044091
Coordinates   1539416..1539856 (+) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain FDAARGOS_669     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534416..1544856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB77_RS08235 (FOB77_08235) - 1534532..1535041 (-) 510 WP_000870956.1 HdeD family acid-resistance protein -
  FOB77_RS08240 (FOB77_08240) gdhA 1535209..1536558 (+) 1350 WP_000200433.1 NADP-specific glutamate dehydrogenase -
  FOB77_RS08245 (FOB77_08245) - 1536628..1537038 (+) 411 WP_000594935.1 peptide deformylase -
  FOB77_RS08250 (FOB77_08250) - 1537312..1539147 (-) 1836 Protein_1505 bifunctional metallophosphatase/5'-nucleotidase -
  FOB77_RS08255 (FOB77_08255) rcrR 1539416..1539856 (+) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FOB77_RS08260 (FOB77_08260) rcrP 1539903..1541720 (+) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  FOB77_RS08265 (FOB77_08265) rcrQ 1541710..1543464 (+) 1755 WP_000851083.1 ABC transporter ATP-binding protein Regulator
  FOB77_RS08270 (FOB77_08270) - 1543572..1544198 (+) 627 WP_000449636.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=340414 FOB77_RS08255 WP_000431168.1 1539416..1539856(+) (rcrR) [Streptococcus agalactiae strain FDAARGOS_669]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=340414 FOB77_RS08255 WP_000431168.1 1539416..1539856(+) (rcrR) [Streptococcus agalactiae strain FDAARGOS_669]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment