Detailed information NTG0340385

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOB77_RS04305
• Genome accession: NZ_CP044091
• Coordinates: 769374..770483 (-)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain FDAARGOS_669
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 764374..775483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB77_RS04280 (FOB77_04280)	-	764890..765570 (+)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-
FOB77_RS04285 (FOB77_04285)	-	765580..766065 (+)	486	WP_001034427.1	arginine repressor	-
FOB77_RS04290 (FOB77_04290)	guaB	766222..767703 (+)	1482	WP_000073440.1	IMP dehydrogenase	-
FOB77_RS04295 (FOB77_04295)	-	767778..768440 (+)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
FOB77_RS04300 (FOB77_04300)	-	768496..769362 (+)	867	WP_000398683.1	GRP family sugar transporter	-
FOB77_RS04305 (FOB77_04305)	recF	769374..770483 (-)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
FOB77_RS04310 (FOB77_04310)	yaaA	770486..770839 (-)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
FOB77_RS04315 (FOB77_04315)	yfmF	771078..772322 (+)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FOB77_RS04320 (FOB77_04320)	yfmH	772324..773607 (+)	1284	WP_000217755.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FOB77_RS04325 (FOB77_04325)	pgsA	773730..774272 (+)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FOB77_RS04330 (FOB77_04330)	-	774272..775111 (+)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=340385 FOB77_RS04305 WP_000264863.1 769374..770483(-) (recF) [Streptococcus agalactiae strain FDAARGOS_669]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=340385 FOB77_RS04305 WP_000264863.1 769374..770483(-) (recF) [Streptococcus agalactiae strain FDAARGOS_669]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444